| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1816 |
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| Symbol | rnr |
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| ID | 4903180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1778035 |
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| End bp | 1780695 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640135046 |
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| Product | ribonuclease R |
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| Protein accession | YP_001066083 |
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| Protein GI | 126452178 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGTGCTG CAAAGACCGC CATTATAGAC GGCCAAACGA ACCTGTCAAC ATTTTTTCGA
GGGCCGTCCG CATCGCGGCG CGCGCGGCGC AACACGCGGC GTGCGGCCCG TTCGCCGCAG
CGGCGGGTGT TAGAATGGGG CGGCATGAGC GGCGCGCCCG TTCGGCTCCG CTTGCCGCGG
TCGCGCAAGC CAAACGCAAC GAGAAAAATC ATCGACAAGC CCTTGAGCAA GTATCCGTAT
CCCATCCCGA GCCGCGAAGA GATTCTCGGC GTGCTGCGCA CGAGCGACGC GCCGCTTGCG
GCGAACGACA TCGCCGAAGC GCTGTCGATC AAGCGTCAGG AGCGCGAAGG ATTTTTCCGG
CGCGTCGCCG CGATGGAGCG CGACGGCCAG ATCCGTCTCG ACAAGCGCGG TCATTATCAG
CTGACGCATC CGTCCAACTT CGTCGCGGGC CGCGTGCAAG GCCACCGCGA CGGCTACGGC
TTCGTGATTC GCGACGACGG GCAGGATGAT CTGTTCCTGC CGAACGCCGA GATGCAAAAG
GTCATGCACA ACGACCGCGT GCTGGCGCGG ATCGTCGGCT ACGATCGGCG CGGCCGGCCG
GAAGGGCACG TCGTCGAGGT GACCGAGCGG GCGAACAAGC GCGTGATCGG GCGCCTCCTG
AACGAGAACG GCGCGCTCAT CGTCGCGCCC GAGGACAAGC GGATCAGTCA CGACATCCTC
GTCACGCAGA ACGCGAAGAA GGCGAAGGTC GGGCAGGTCG TCGTCGTCGA GCTCACCGAT
TTCCCGAGCC GTCATTCGCA GCCGCTCGGC CGCGTCTGCG AGGTGCTCGG CGATATCGAC
GATCCCGGCA TGGAGATCGA GATCGCGGTG CGCAAGTACG GCGTGCCGCA CGAATTCGGC
GCGCAAGCGC TCGGCGAGGC CGCGGCGCTG CCGGACAAGG TGCGGCCCGC GGATCTGCGC
TACCGCGTCG ACTTGCGCGA CGTGCCGCTC GTCACGATCG ACGGCGAGGA CGCGCGCGAC
TTCGACGACG CCGTGTACTG CGAGCCCGCC GCGGTCGGCC GCGGCGAGGG CTTCCGGCTC
ATCGTCGCGA TCGCGGACGT GTCGCACTAC GTGCAGCCAG GCAGCCCGCT CGACGCCGAC
GCGGTCGAAC GCAGCACGTC GGTCTATTTC CCGCGCCGGG TGATTCCGAT GCTGCCGGAG
AAGCTGTCGA ACGGGCTCTG CTCGCTGAAT CCGCAGGTCG ATCGCTGCGT GCTCGCGTGC
GACATGATCA TCAACGCGCG TGGCGACATC AAGGCGTATC AGTTCTATCC GGCCGTGATC
CACTCGGCCG CGCGGCTCAC GTACACCGAA GTGGCCGCGG TGCTCTCGAA CACGAAGGGG
CCGGAGGCCG CGCGCCGCGC CGAGCTGATG CCGCACCTGC AGCACCTGTA CGGCGTCTAC
AAGGCGCTCT TCGTCGCGCG GCAGAAGCGC GGCGCGATCG ACTTCGACAC GACCGAGACG
TACATCGTCT GCAACGCACA GGGCAAGATC GAGCAGATTC TGCCGCGCCA GCGTAACGAC
GCGCATCGGC TGATCGAGGA ATGCATGCTT GCCGCGAACG TCTGCGCGGC CGATTTCCTC
AAGCGCAACA AGCACCCGGG CCTCTACCGC GTGCACGCGG GGCCGACGCC CGAAAAGCTC
GAGAATCTGC GCGCGTTCCT GCGCGACATG GGGCTCACGC TGGGCGGCGG CGACACGCCG
CACGCGAGCG ATTACGCGGC GCTGATGGCG CACATCCGCG ACCGGCCCGA CGCGCAGATG
CTGCAGCCGA TGCTGCTGCG CTCGATGCAG CAGGCGGTCT ACAGTCCGGA CAACATCGGC
CACTTCGGTC TCGCGTACGA CGCGTACGCG CACTTCACGA GCCCGATTCG CCGCTATCCC
GATCTGCTCA CGCACCGCGC GATCTACGCG ATCCTGTCCG GCAAGAAGTA CACGCCGAAG
TCGCCGGAAG GCGTCGAGCT GAACACCGCG CTGTCGCCGC GCGCGCGCGC GATGCAGCGC
GAGGACGACG AGGCGCGCGG CCGCGCGCGG TCGAACGCGG CGATCTGGGA GGAGCTCGGG
CTGCACTGTT CGTCCAACGA GCGGCGCGCG GACGAAGCGT CGCGCGACGT CGAGGCATGG
CTCAAGTGCT ATTTCATGCG CGACAAGCTC GGCGAGGAAT ACGGCGGGAT GGTGAACGGC
GTCACGTCGT TCGGCATCTT CGTGCAGCTC GATGCGCTTT TCATCGAAGG CCTCGTGCAT
GTGACCGAGC TCGGCGCCGA TTATTTTCAG TACGACGAAG TCAAGAACGA ACTGCGCGGC
GAGCGCACGG GCATTCGCTA CCGGCTGTCC GACCGCGTGC GCGTGCAGGT GAGCCGCGTC
GATCTCGATG CGCGCAAGAT CGATTTCCGC CTCGTGCGCG AGACGCCCGT GAAGGCGCCG
CGCCCGGCAT CGGCGGTGGC GGCCGAAGCG GGCGCGGGCG GGCCGCGCGT GCGCGCGCTG
CCGCCCGCCG AAGGCGCCGC GCGACGCAAG AAGGCCGCGA GCGCGCCGAG CGCGGCGGTG
AAGGAGGCCC GGGCGGCCCG CAAGAAGGGC GCCGCGTCGA AGCCGGCCGC GAAGAAGGCG
CGTTCGCGCA AGAAGTACTG A
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| Protein sequence | MCAAKTAIID GQTNLSTFFR GPSASRRARR NTRRAARSPQ RRVLEWGGMS GAPVRLRLPR
SRKPNATRKI IDKPLSKYPY PIPSREEILG VLRTSDAPLA ANDIAEALSI KRQEREGFFR
RVAAMERDGQ IRLDKRGHYQ LTHPSNFVAG RVQGHRDGYG FVIRDDGQDD LFLPNAEMQK
VMHNDRVLAR IVGYDRRGRP EGHVVEVTER ANKRVIGRLL NENGALIVAP EDKRISHDIL
VTQNAKKAKV GQVVVVELTD FPSRHSQPLG RVCEVLGDID DPGMEIEIAV RKYGVPHEFG
AQALGEAAAL PDKVRPADLR YRVDLRDVPL VTIDGEDARD FDDAVYCEPA AVGRGEGFRL
IVAIADVSHY VQPGSPLDAD AVERSTSVYF PRRVIPMLPE KLSNGLCSLN PQVDRCVLAC
DMIINARGDI KAYQFYPAVI HSAARLTYTE VAAVLSNTKG PEAARRAELM PHLQHLYGVY
KALFVARQKR GAIDFDTTET YIVCNAQGKI EQILPRQRND AHRLIEECML AANVCAADFL
KRNKHPGLYR VHAGPTPEKL ENLRAFLRDM GLTLGGGDTP HASDYAALMA HIRDRPDAQM
LQPMLLRSMQ QAVYSPDNIG HFGLAYDAYA HFTSPIRRYP DLLTHRAIYA ILSGKKYTPK
SPEGVELNTA LSPRARAMQR EDDEARGRAR SNAAIWEELG LHCSSNERRA DEASRDVEAW
LKCYFMRDKL GEEYGGMVNG VTSFGIFVQL DALFIEGLVH VTELGADYFQ YDEVKNELRG
ERTGIRYRLS DRVRVQVSRV DLDARKIDFR LVRETPVKAP RPASAVAAEA GAGGPRVRAL
PPAEGAARRK KAASAPSAAV KEARAARKKG AASKPAAKKA RSRKKY
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