Gene BURPS1106A_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1796 
Symbol 
ID4902148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1757049 
End bp1758857 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content71% 
IMG OID640135026 
Producthypothetical protein 
Protein accessionYP_001066065 
Protein GI126451635 
COG category[S] Function unknown 
COG ID[COG4655] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00710697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTAG CCCGCCGCCG CGCCGAGCGC CGCCCGCCCG CCCGCGGGCG CGGGCCGATC 
GCGCGCGAGC GCGGCTCGTT CGCGCTTGTC GCGGCGATCT GGATGCTGGT CGCCATCGCC
GCGCTCGGCG CGGTCGACAT CGGCAACGTG TTCTTCGTGC GGCGCGACTT GCAGCGGGTC
GCCGACATGG CCGCGCTCGC CGGCGCGCAG AGAATGGACG ATCAGTGCGC GCAGCCGAAC
GCGGCGGCCG CCGCGAACGC GCGCTCGAAC GGCTTCGATC CGGCGGCGGG CGGCAACACG
CTCGCGCTCG CGTGCGGGCG CTGGGATACG CAAAGCAACG CGGGGCCGAG CTACTTCAAC
GCGGCCGCGA CGCCGCTCAA CGCGGTGCAG GTGACGGCCA CGCAGAGCGT GCCGTATTTC
TTCCTCGGCC CATCGCGCAC GGTGAGCGCG ACGTCGACCG CGAAGGCGAC CAACGTCGAC
CAGTTCACGA TCGGCACGAC GCTCGCGAGC GTGCAGGGCG GCCTCGTGAA CAATGTGCTC
AATGCGTTGC TCGGCACGAA CCTGGGTTTG AGCGCGCTGT CGTATCAGGC GCTCGCGTCG
ACGCAGATCA AGATCGGCGA CCTGATGGCG GCCGCGAACG TGCTGACCGT CAACGAGCTG
CTCGCGACGC AGGTGACGGC CGGACAGTAC GCGCAACTGA TGCTGACCGC GCTGTCGCGC
ACGCAGGTCG TGAACGCGAA TCTGCAGGCG AGCGTCGCCG CGCTGCAGGC GATCGCCGGC
GCGCATCTCG GCGGCGGGAC ATTCAGGCTC GGCGGCCAGC CGGGCGCGCC CGGCGTGTTC
GCGCTCGGGC TGTCCGACAC GCAGGCGGCC GCCGACGCGA AGATCAACGT GTTCGACGCG
CTGATGGTCG CGGCCGAAGT CGCGGCGGCG GGCAAGCCGG CCGTCGACGT CGCGACGGGG
CTGCAGCTCG CGGGCCAGGG CGCGAGGCTG AAGCTGCAGG TCATCGAGCC GCCGACGATC
GTGATCGGCG AGGCGGGCAC GGACCCGAAG ACGGGCGCGT GGCGCACGCA GGCGAACAAT
GCGCAGATTC GGTTGTATGT GAGCGTCGAT CTCGGCACGA CGGGCTTGTC GCCCACCGGC
GTGCTGCTGC CGATCGCGCC GCTCGTGAGC CTCGTGCAGA ACCTGATCCA GGTCGATCTG
AGCCTGCCGC TCACGCTGCA GGTCGCGACG GGCTCCGCGT GGCTGCAGTC GACGAGCTGC
GCGGCGAGCG CCGCCGCGAG CCGCGCGACG CTCGGCGTGC AGCCGGGCCT CGCGAACCTG
TGCATCGGCG ACGTGCCGAC GGATCTCCCC GCGCAGCAGA CATTCGCCTG CAACGTGCCC
GCGACGCTCG CGACGCTCGG CGTGCTGAGC GCGCCGCTGC TGCAGGTCAA GTCGGCCGTC
GCGCTGCCGG CGGTCGTGCC GAAGGCGAGC GCGGCGACGC TCACGTTCAA CGGCGTGGCG
GGCGACGCCG ACGACTATCA GACGACGAAT TCGAACGCGG TGGGCTCGGT GATCGCGAAC
GCGCTGTCGG GCGCCGCGCA ATCGCTGACG GGATCGAACG GCCTTGCGCT CTACGTGCTC
GGCGTGTCGG TGCCGGTCGG CACGATACTC AATCCGGTGG TCTCCGTGCT GCTGAACCTG
CTCGGCCCCG TGTTGAGCTC GCTCGATCAG GTCGTCGTGC CGCTGTTGAA CCTGCTCGGC
GTGCAGCTCG GCGCGGCGAC GGTTCACAAT CTGGCGCTGA CCTGCGGCAC CGCGCAAACG
GTCTATTGA
 
Protein sequence
MPLARRRAER RPPARGRGPI ARERGSFALV AAIWMLVAIA ALGAVDIGNV FFVRRDLQRV 
ADMAALAGAQ RMDDQCAQPN AAAAANARSN GFDPAAGGNT LALACGRWDT QSNAGPSYFN
AAATPLNAVQ VTATQSVPYF FLGPSRTVSA TSTAKATNVD QFTIGTTLAS VQGGLVNNVL
NALLGTNLGL SALSYQALAS TQIKIGDLMA AANVLTVNEL LATQVTAGQY AQLMLTALSR
TQVVNANLQA SVAALQAIAG AHLGGGTFRL GGQPGAPGVF ALGLSDTQAA ADAKINVFDA
LMVAAEVAAA GKPAVDVATG LQLAGQGARL KLQVIEPPTI VIGEAGTDPK TGAWRTQANN
AQIRLYVSVD LGTTGLSPTG VLLPIAPLVS LVQNLIQVDL SLPLTLQVAT GSAWLQSTSC
AASAAASRAT LGVQPGLANL CIGDVPTDLP AQQTFACNVP ATLATLGVLS APLLQVKSAV
ALPAVVPKAS AATLTFNGVA GDADDYQTTN SNAVGSVIAN ALSGAAQSLT GSNGLALYVL
GVSVPVGTIL NPVVSVLLNL LGPVLSSLDQ VVVPLLNLLG VQLGAATVHN LALTCGTAQT
VY