| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1793 |
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| Symbol | |
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| ID | 4899856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1754657 |
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| End bp | 1755667 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640135023 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001066062 |
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| Protein GI | 126452133 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.105995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCCA GCCGCCTCGG CGCAATCGCG CTCGTTCTCG GCGCAATCGG CGTGCTGATG
CTCGCCGCGC TCGCGATCAT GCAGGCCGTG CTCGCGCGGC GCACCGGCCG CACGCTCGCG
GACGCGCTCG ATCAGCGCGC CGCCGCGTTG GAGGCGGCCG CCGCGCGGGT CGCGGCGGGG
GCGGCCGGCG CGGCGCGCGC GGGCATGCCC GAGGCGGCGC CTGACGCGCG CCGTCCGCGC
TTCGCGGCGC TGCTCGATCG CGCGGGCCGG TTCGGAATGC GGCTGCTCGA TACGCGGCTC
GGCAAGCAGA TCGTCGCCGA CGAAGACCGG ATGCTGCTCG AACAGTGCGG CTACGTCGAC
GCGCACACGC GCGGCATCTT CCTGAGCGCG CGGATCGCGT GTGCGATCGC GCTGCCCGCC
GCCGTCGCGC TCGTCGGCGG CGAGCCGGTC CGCACGCATC TGGGCGCGTG GGTCGCGCTG
TCGGTGATCG CCGGCTTCAT GCTGCCGAAG ACCTACGTGC GCCGCCGCGC GGCGGCGCGC
CGCCAGTCCG TCGTCGACGA GATGCCGCTG CTCGTCGACA TGCTGCGGCT CTTGCAGGGC
GTCGGGCTGT CGCTCGACCA GAGCATCCAG GTCGTCACCA ACGACTTCAG GGGGATGCTG
CCCGTGCTGT CGTCGGAGCT CGGGATCGCG CAGCGGCAGT TCGTCGCGGG GCGCACGCGC
GAGCAGTCGC TGCAGCGTCT CGCGACGAGC TTCGACAACG AGGACCTGCG CGCGATCGTG
CGCCTGCTGA TCCAGGTCGA CAAGCACGGC GGCGCGGTGC AGGAGCCGCT CAAGCAGTTC
GGCGACCGGC TGCGCGAAGT GCGCCGCGCG ATGCTGCGCG AGCGCATCGG CCGCCTTACG
GTGAAAATGA CGGGCGTGAT GATTCTCACG CTGCTGCCCG CGCTGTTCAT CGTGACGGCG
GGGCCGGGGA TGCTCGCCGT CACGCATGCG CTCACGGCCG CGCGCCGCTA G
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| Protein sequence | MDPSRLGAIA LVLGAIGVLM LAALAIMQAV LARRTGRTLA DALDQRAAAL EAAAARVAAG
AAGAARAGMP EAAPDARRPR FAALLDRAGR FGMRLLDTRL GKQIVADEDR MLLEQCGYVD
AHTRGIFLSA RIACAIALPA AVALVGGEPV RTHLGAWVAL SVIAGFMLPK TYVRRRAAAR
RQSVVDEMPL LVDMLRLLQG VGLSLDQSIQ VVTNDFRGML PVLSSELGIA QRQFVAGRTR
EQSLQRLATS FDNEDLRAIV RLLIQVDKHG GAVQEPLKQF GDRLREVRRA MLRERIGRLT
VKMTGVMILT LLPALFIVTA GPGMLAVTHA LTAARR
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