| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1792 |
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| Symbol | |
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| ID | 4900643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1753644 |
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| End bp | 1754651 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640135022 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001066061 |
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| Protein GI | 126453046 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0984165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGCG CGGCGCTCTG GGCGCTCGCG CTCGCGCTGC TGTGCGTCGC CGGGGCGTTC
GCGCTATGGC GGCGCGGCGA GGCGAACAGG GAGCGCGCGC ATGCGGCGCG CTACATCGAC
AGCCGGCTCG AGCCCGGCGC GCGCGCGAGC GCGCAGCCGA AGATGCCGGC CGCGGCCGAG
CCCAAGCGCG CGGCGCCCAT GCCGGCCGCG GGCGCGGCGG GCGGCGCGCG CGCGGAGAAG
CCCGCCGAAG GGCTCGCGCG CTGGCGTGAG CGCGCGGCCG ACGCATGGCT GAACGTGTCG
AACCGCGCGG GCGTGTCCGA GATCCGCGCG CCGCTCGCCG CGCTCGCCGC GACGACGGCC
GTCGCCACGC TGTGGGCGGG CCTGCGCGGC GGGCTGCTCG CCGCCTGCGC GGCGCTCGTC
GCGGGCGCGA CGCTCGCGGT CTTCTGGCTC GTGTCGCGGA TGCAGAAGCG GCGGCTGCGG
ATCGTGCGCC AACTGCCGTC GTTCCTCGAC GGCATCGTGC GTCTCGTCAC GCTCGGCAAC
AGCGTGCCGG CCGCGTTCCA GGCGACGCTG CAGACGACCG AGGCGCCGCT GCGCGGCTGT
CTCGATCACG TGTCGCGGAT GCTGCGCTCG GGCGTCGAGA TCGACCGTGC GATGGTGTCC
ATCGCGGCGC TCTACCGGAT CAAGGAATTC GAGCTCGTCG GCTCGGTGCT GCGGTTGTCC
GTCAAGTACG GCGGCCGCGC CGACGTGATG CTCGACCGAA TGGCCGTGTT CATGCGCGAT
CTCGAGCAGG CCGAGCGCGA GCTCGTCGCG ATGTCGGCGG AGACGCGGCT GTCGGCATGG
GTGCTCGGCG CGCTGCCCGT GGGCATCGGC AGCTTCGTGA TCGCGACGAA TCCGAAATAT
TTCAGCGCGA TGTGGCTTGA CCCGACGGGC CGCCAGCTCG TGTATCTCGC ATTCATCCTG
CAAATCGCCG GCGGCTACTG GCTGTACCGG CTCGCCCGAT TGAGGTGA
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| Protein sequence | MSSAALWALA LALLCVAGAF ALWRRGEANR ERAHAARYID SRLEPGARAS AQPKMPAAAE
PKRAAPMPAA GAAGGARAEK PAEGLARWRE RAADAWLNVS NRAGVSEIRA PLAALAATTA
VATLWAGLRG GLLAACAALV AGATLAVFWL VSRMQKRRLR IVRQLPSFLD GIVRLVTLGN
SVPAAFQATL QTTEAPLRGC LDHVSRMLRS GVEIDRAMVS IAALYRIKEF ELVGSVLRLS
VKYGGRADVM LDRMAVFMRD LEQAERELVA MSAETRLSAW VLGALPVGIG SFVIATNPKY
FSAMWLDPTG RQLVYLAFIL QIAGGYWLYR LARLR
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