Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1790 |
Symbol | |
ID | 4901838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1751066 |
End bp | 1752304 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640135020 |
Product | hypothetical protein |
Protein accession | YP_001066059 |
Protein GI | 126453930 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.655567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGA GAACACTCTC CTTGGCTGAA CCCGCCGTCA CCGACTACTT CGTCTGCGCG TCGCCCCATG GCGAGCACGT GAGCTGGCTT GCGCAAACGC TCGTGTCGGC GGGGACGGTC GAGCCCGCGC CGCTCGAGCC GACGGCGCTC GCGCAGCGGA TCGCGGGGCT CAATCCGGTG CTCGTCTTCG TCGATTTCTC GGGCGGCCAC GCGCAGGCGG CGAGCGCGGC GGCCGCCGCG CTGCGCGTGT CGCATCCGGG GCTGCCGATC GTCGCGCTCG GCTCGCTCGG CGAGCCGGAA AGCGCGCTCG CCGCGCTGCG CGCGGGCGTG CGCGACTTCA TCGATTTCTC GGCGCCCGCC GAGGACGCGC TCAGGATCAC GCGCGGGCTG CTCGATCACG TCGGCGATCA GCCGAGCCGC CACGGCCGGC TGATCGCGCT GCTCGGCGCG CGCGCCGGAA TGGGCGCGAG CACGCTCGCC GCGAACCTGT CGGTGCTGGT GCAAAAGCGC TCGGCCGCGC TCGGCCGCCA GACGGCGCTC GTCGATCTCG GGCTGCCGGC GGGCGACGGC GCGCTGTTCC TGAACACGCG CTGCGAATTC GATTTCGTCG AGGCGGTGCG CAACCTGCGC CGCTTCGACC GGACCTTCGT GAACACGGCG CTCGCGCGCC ATGCGAGCGG CGTCGCGCTC ACGTCGCTGC CGCCGAACCT GGCCGGGCTG CGCGATGTGT CGTACGCGTC GTGCGTGGGC CTGATGAACC GGCTGCGCGC GTTCTTCGAT TGCCAGATCG TCGATCTGGG CGGCTTCTCG AACCGCGATT TCGTCGCGCA GACCGCGAAC GCCGCCGACG AATCGTGGCT CCTGTGCGAC CAGGGCGTCG CCTCCGTCGT GTCGGCCGTC GAGCTGCTCG AGTCGCTGCG CGACACGGGC GTGGACACGG AGAACGTGCG CCTCGTCGTC AACCAGTACG ATCCGGCGCT CGGCCTCGCG CCCGCGCAGA TCGCGGAGCG CCTCGGCCTC GCGCTCGCCG CGACGCTGCC GTCGCGGCGC GTGCCGATCG GGCACGCGGC CAATCAGGGC AAGCTGATCG TCGACGTTGC CGAGCGCGAT CCGTACGTGC GCGCGCTCGA GCCGCTCGTC GAACGCGCGA CGGGCGGCGC GGGAGCCGCC GCGCCGCGCC CGGCGGGCGG TCTTTCCGCG CTCAGGCGCT TCATTCAACC CACCTCCAAG CGGTCGTAA
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Protein sequence | MNARTLSLAE PAVTDYFVCA SPHGEHVSWL AQTLVSAGTV EPAPLEPTAL AQRIAGLNPV LVFVDFSGGH AQAASAAAAA LRVSHPGLPI VALGSLGEPE SALAALRAGV RDFIDFSAPA EDALRITRGL LDHVGDQPSR HGRLIALLGA RAGMGASTLA ANLSVLVQKR SAALGRQTAL VDLGLPAGDG ALFLNTRCEF DFVEAVRNLR RFDRTFVNTA LARHASGVAL TSLPPNLAGL RDVSYASCVG LMNRLRAFFD CQIVDLGGFS NRDFVAQTAN AADESWLLCD QGVASVVSAV ELLESLRDTG VDTENVRLVV NQYDPALGLA PAQIAERLGL ALAATLPSRR VPIGHAANQG KLIVDVAERD PYVRALEPLV ERATGGAGAA APRPAGGLSA LRRFIQPTSK RS
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