Gene BURPS1106A_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1790 
Symbol 
ID4901838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1751066 
End bp1752304 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID640135020 
Producthypothetical protein 
Protein accessionYP_001066059 
Protein GI126453930 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.655567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGA GAACACTCTC CTTGGCTGAA CCCGCCGTCA CCGACTACTT CGTCTGCGCG 
TCGCCCCATG GCGAGCACGT GAGCTGGCTT GCGCAAACGC TCGTGTCGGC GGGGACGGTC
GAGCCCGCGC CGCTCGAGCC GACGGCGCTC GCGCAGCGGA TCGCGGGGCT CAATCCGGTG
CTCGTCTTCG TCGATTTCTC GGGCGGCCAC GCGCAGGCGG CGAGCGCGGC GGCCGCCGCG
CTGCGCGTGT CGCATCCGGG GCTGCCGATC GTCGCGCTCG GCTCGCTCGG CGAGCCGGAA
AGCGCGCTCG CCGCGCTGCG CGCGGGCGTG CGCGACTTCA TCGATTTCTC GGCGCCCGCC
GAGGACGCGC TCAGGATCAC GCGCGGGCTG CTCGATCACG TCGGCGATCA GCCGAGCCGC
CACGGCCGGC TGATCGCGCT GCTCGGCGCG CGCGCCGGAA TGGGCGCGAG CACGCTCGCC
GCGAACCTGT CGGTGCTGGT GCAAAAGCGC TCGGCCGCGC TCGGCCGCCA GACGGCGCTC
GTCGATCTCG GGCTGCCGGC GGGCGACGGC GCGCTGTTCC TGAACACGCG CTGCGAATTC
GATTTCGTCG AGGCGGTGCG CAACCTGCGC CGCTTCGACC GGACCTTCGT GAACACGGCG
CTCGCGCGCC ATGCGAGCGG CGTCGCGCTC ACGTCGCTGC CGCCGAACCT GGCCGGGCTG
CGCGATGTGT CGTACGCGTC GTGCGTGGGC CTGATGAACC GGCTGCGCGC GTTCTTCGAT
TGCCAGATCG TCGATCTGGG CGGCTTCTCG AACCGCGATT TCGTCGCGCA GACCGCGAAC
GCCGCCGACG AATCGTGGCT CCTGTGCGAC CAGGGCGTCG CCTCCGTCGT GTCGGCCGTC
GAGCTGCTCG AGTCGCTGCG CGACACGGGC GTGGACACGG AGAACGTGCG CCTCGTCGTC
AACCAGTACG ATCCGGCGCT CGGCCTCGCG CCCGCGCAGA TCGCGGAGCG CCTCGGCCTC
GCGCTCGCCG CGACGCTGCC GTCGCGGCGC GTGCCGATCG GGCACGCGGC CAATCAGGGC
AAGCTGATCG TCGACGTTGC CGAGCGCGAT CCGTACGTGC GCGCGCTCGA GCCGCTCGTC
GAACGCGCGA CGGGCGGCGC GGGAGCCGCC GCGCCGCGCC CGGCGGGCGG TCTTTCCGCG
CTCAGGCGCT TCATTCAACC CACCTCCAAG CGGTCGTAA
 
Protein sequence
MNARTLSLAE PAVTDYFVCA SPHGEHVSWL AQTLVSAGTV EPAPLEPTAL AQRIAGLNPV 
LVFVDFSGGH AQAASAAAAA LRVSHPGLPI VALGSLGEPE SALAALRAGV RDFIDFSAPA
EDALRITRGL LDHVGDQPSR HGRLIALLGA RAGMGASTLA ANLSVLVQKR SAALGRQTAL
VDLGLPAGDG ALFLNTRCEF DFVEAVRNLR RFDRTFVNTA LARHASGVAL TSLPPNLAGL
RDVSYASCVG LMNRLRAFFD CQIVDLGGFS NRDFVAQTAN AADESWLLCD QGVASVVSAV
ELLESLRDTG VDTENVRLVV NQYDPALGLA PAQIAERLGL ALAATLPSRR VPIGHAANQG
KLIVDVAERD PYVRALEPLV ERATGGAGAA APRPAGGLSA LRRFIQPTSK RS