| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1687 |
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| Symbol | |
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| ID | 4899502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1641769 |
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| End bp | 1643133 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640134917 |
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| Product | lysM domain-containing protein |
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| Protein accession | YP_001065958 |
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| Protein GI | 126452942 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.482886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCGC GCGGGTTCGT GACGAAGTAC GTGCTGACGG CATGCTGTGC CGCAGCGACG
GCGCTCGCGG CGCAGCACGC CGCCGCGCAG TCGGCTAAGA ACCGGTCGGT GGCGACCGTC
GACTACACGA CGCGCAGCGG CGACACGCTG TACGACGTCT CGGCCCGCTA TCTGCAAGGC
ACGGACGACT GGCCGCTCGT CGCGCAACTG AACGACGTGC CGGTGCCGAA GCATCTGCAG
CCGGGCGTCG TGCTGAAGCT GCCCGCCGCG CGGCTGCGCA AGGAGCGGCT GTCGGCGCGG
GTGATCGCCG CGCACGGCAC GGTCGAGAGC GCGGGGCGCG GCTCCGCGCA GTTCGCGCCC
GTCGCCGTCG ACGCGACGCT CACGGAAGGC GACCGCCTGC GCACGGGCTC GAACGCGTTC
GTCACGCTCG AGCTCTCGGA CGGCACGCAC CTGAGCCTGC CGCCCGACAG CCAGATCGAT
CTCGCGACAC TGCGTCGCAC GGTGCTCACG GGCACGCTCG AGCGCGTGAT CGATCTGCGC
CGCGGCTCGG TCGACAGCGA AGTCACCCAT CTGAAGAAGA AGGACGATCG CTTCCAGATC
CGCTCGCCGT CGGTCGTCGC CGGCGTGCGC GGCACGCGCT TTCGCGTGAA TTACGACAAG
GATGGCCGCG CGTCGACGAC GGTCGAAGTG CTCGACGGCA CGGTGGGCGT CGCGCCGAGC
GCGAAGCGCT CGGCCGACAC GCTCGTGCAC GCGAACTTCG GCAACGTGAC GAGCGCAAGC
GGCGTCGTCG GCAGCCCGAT CGCGCTGCTC GACGCGCCGC AGCTCGCCAA CCCGGCGAAG
ATCCAGGACG ATCCGCAGGT CGCGTTCGAC CTCGTGCCGC TCGGCGGCGC GCAAAGCTAT
CACGTGCAGA TCGCGCGCGA CGCGGGCCTG TACGATCTCT TCAAGGAAGT GCAGGTGTCG
GCGCCGCGCG CGACGTTCGC CGACGTGCCG GACGGCACCT ATTTCGTCCG GATCGCGGCG
ATCGATTCGC ACGGTCTCGA GGGCCAGCCG CGCATCTACG CGTTCGAGCG GCGCCGCTTC
GGGGTCGACG CGTCGGCCGC GCCCGCCGAC GGCGGCTACG CGTTCCGCTG GTCGACGACG
CAAGACGGCG CGGCGGCCGG CGCGACGCGC TTTCGCTTCG TACTGTCGCG CTCGAAGGAC
CTGAGCAACC CGATCGTCGA CCAGGTCGAC GCGCAGGGCG GGCGCATCGC CGTGTCGAAC
CTGACGCCGG GCGACTACTA CTGGAGCGTG ATCGCGGAGC GCTACGAAGG CGGCCGTTTC
CACGAAAAGG CCAGCGCGGT CAACGCGTTC ACGATCGCGC GCTGA
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| Protein sequence | MNARGFVTKY VLTACCAAAT ALAAQHAAAQ SAKNRSVATV DYTTRSGDTL YDVSARYLQG
TDDWPLVAQL NDVPVPKHLQ PGVVLKLPAA RLRKERLSAR VIAAHGTVES AGRGSAQFAP
VAVDATLTEG DRLRTGSNAF VTLELSDGTH LSLPPDSQID LATLRRTVLT GTLERVIDLR
RGSVDSEVTH LKKKDDRFQI RSPSVVAGVR GTRFRVNYDK DGRASTTVEV LDGTVGVAPS
AKRSADTLVH ANFGNVTSAS GVVGSPIALL DAPQLANPAK IQDDPQVAFD LVPLGGAQSY
HVQIARDAGL YDLFKEVQVS APRATFADVP DGTYFVRIAA IDSHGLEGQP RIYAFERRRF
GVDASAAPAD GGYAFRWSTT QDGAAAGATR FRFVLSRSKD LSNPIVDQVD AQGGRIAVSN
LTPGDYYWSV IAERYEGGRF HEKASAVNAF TIAR
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