Gene BURPS1106A_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1610 
Symbol 
ID4899631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1562992 
End bp1566327 
Gene Length3336 bp 
Protein Length1111 aa 
Translation table11 
GC content67% 
IMG OID640134840 
ProductRhs element Vgr protein 
Protein accessionYP_001065881 
Protein GI126451485 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAG TCGCCGCATT GACGGGCTAT TCTCAAACGA CTCGCCACAT CCGGATCGAC 
ACGGCGATGC CGGGCGCGTT CGTGGTCGAA CGTTTCCATG GGCGCGAGGG CGTCAACGAA
TCGTTTCGCT TCGAGATCGA CGTGCTGTCG AGCGAGCCGT TTCTCGATCT GACGCCGCTC
ATCGGCCACG CGGCGCGGCT GCGTCTCGCG ACGGGCGCGG GCGAGCGCAG CTGGAACGGC
TATGTGACGC ATGCGGCGTA TGCGGACAGC GACGGCGAGA TCACCCGCTA TCGCCTCACG
ATGGAGTCGT GGCTCGCGCT GTTGCGCCTG CGTCGCAATT GCCTGTACTT CGTCGACGTC
GACACGAAGG ACATCTGCGA GCGTGTGTTC GGCGATTATC CGCAAGCGCG TTGGCGCTAC
GAACTGAAGG AACCGCTGCG CAAGTTCAGC CTGCGCGGCC AGTACCGGGA GACCGACGAC
ACGTTCGTGC TGCGCCAGCT CGCCGAAGCC GGCCTGTCGT TCAGGATCGA GCATGCGCAG
GATGCGGGCA AGGAAGCGTC GGGCGACCAT ACGGTCGTCG TGTTCGATCG GCGCGCGCCA
TTTCGGCACG GCAGCACGAT CGCATACAAC CTGCAGGACG TCGGCGATCC GGACGGCGTG
ATCACGCAGT TTTCCGAACG CCATCAGATG GTGCCGGACC GGGTCGTCGC GACGAGCTGG
AAAGCCGACG AATTGCTCGC GCTTGCCGGG CACGCGCAGC AGCCGCCCGA GGACAAGGCG
CCGGTGCTGC CCGTGCGCGA AATCTACGAC GGCCAACGCG CGGGCCGCTT CGACACGATC
GACGACGCGC AGCGCTTCGC CGAGCAGCGG CTCGACGCGC TGCGCCTGCC GAAGCGGATC
CATTACGGCG CGGGCTCGTC GCGCACGCTC GAGATCGGCG CGGTCCATAC GCTCGCCGGT
TATCTGGACC GTGCGATCAC GTTCGTGCCG CTGTCGATCG AGCACGAGGC GGTCAACAAT
CTCGGCGCCG ACATCGGCGC GCTGCTCGGG CGCGGCGAGC TCGACAAGGG GCTGTACCGC
AACCGTTTCG TCGCGGTGCC CGACGGCACG CCGATCGTGC CGCCGCATCG CGATCGGCCG
ATCGTGCACG GCGTGCAGAC CGCGATCGTC GTCGGCGAGG CCGGCAGCCG CGTCAGCAGC
ACGCGCGATC ATCAGGTGCG CGTGCAGTTT CCGTGGATGC GCGGCACGGC GCCGCTGCCC
GGCGGCCTGA CCGACACGGC GAGCCGCTCG AATCCGGCCG GGCACGCGCC GGGCGATCAT
CGCTCGGGCG TGCTCGCGCG CGTCGCGGAA TCATCGGCCG GGCCGAACTT CGGGCATGCG
TTCACGCCGC GCGTCGGCGC CGAAGTGGTG ATCGGCTTCG AGTCGGGCAA CATCGACATG
CCCGTCGTGC TCGGCCAGGT CTACGGCGGG CGCGTGCAGC CGCCGTTCGC GGCGGGCGAA
GGCAGCGACG CGAACCATCC GGGCACGCTG ACCGGCCTGC AGACGCAAAC GCTCGATGGC
CAGTCCGGCA GCCGCTGGGT AATGGACGAC GCCGCGGGAC AACTGCGGCA CGAGCTGAGC
AACTCGACCG CGAACAGCCG GCTCGCGCAG GGTTACCTGA TCGATCAGCA GGGCGCGATG
CGCGGCGCGT ATCGCGGCGA AGGCTTCGAG CTCGCGACCG ACGGTTGGGG CGTCGTGCGC
GCGGGCGAAG GCGTGCTCGT ATCGAGCACG GCGCGGCGGC TCGCGACGTC GACGCAGATG
GACGTCGCGC AAAGCGTCGG ACAACTGAAG CAGGCGGTGC GGACCGCGCA GGGCATGAGC
GAATCCGCCG CCGCGGCGCA CGCGGGCGGG TTGGCCGCCA ATGCCGCGCA GGCGGATTTC
CTGAAGGCGA TCGATCCGGC GCAGGACGGC AAGTACACGG GCGCGGTCAA CGGGCAGAGC
GCGACGAAGG CGAGCGGCGC GCAGCGCGAC GGCGGGGAGC CGGTCGAGCG CTTCGCCGCG
CCGGCCGTGC TGATGGAGTC GCCGGAGAAC ATCGTGCTGA CGACGCCGCA CAGCGCCGTC
TCGTATGCGG CGCAGCACGT GCATTTGACC GCGCAGCGCG ACGCGCACGT AGCGGCCGCC
GCGACGGTCG CGGCCGCGTC GGGCGATGCC GTGAGCCTGT ATGCCGCCGC GGGCGGCCTC
CGGGCGATCG CGAGCGACGG GCCGGTGAGC GTCGAGGCGC ATACGTCGAC GATGGAGATT
CTCGCGGATC AGTCGGTGCG CATCACGTCG ACCGACGATC GCATCGACGT GCTCGCGAAG
GACGCGATCG TGCTGCAGCA GGGGCCGAAC CGGATCACGC TGAAGGGCGG CGACATCACG
GTCGAGACGC CGGGGCAGTT CCTCGTGAAG TCGGGCGCGC ATCCGTTTCC GGGGCCGGCC
GCGCAGAGCG TTTCACTGCC GCCGCTGCCG ATTCCCGCGC CGCTCGCGCT GTTCGACGAA
CAGATTCGCT TCGTCAACGA AGACGGCGAG CCGCTCGGCA ACGTCGCGTA CCAGCTGAAG
CTCGCCGATG GCTCGACCGT GTCGGGCGTG ACCGACGACA ACGGCAGAAC CGAGCGCGTA
TCGACGGACG AGCCGACGGC GATCCAGTCG GCGACGCTCA CGCCGACGCA GGTCGTCGAC
TGCTGCGGGC GAACTTCGGA TGTGCCGCCG CCGGCGGTGA AGGTCGACAT CAAGGGCGTC
GGCACCCACG ACACGCTGGT GGGCAGCTCG GAGCAATCGG TCACGGTCAA GGGCGAGAGC
CGGCCGCTGA CCGACGGCGA GATCGAGATG GCGAAAACCG TGTTTCAGGA CAGCATCGAT
TACAGCGCGG TGCGCGTGCA CAAGGGCAGC TATTTCTGGT TCAACTTGCA GAGCAAGCGT
ACGGCCGTGA CGCCGAACAA TACGATGTAT TTCCGCGAAG AGGATTTCGT GGAGGATTTT
TCGGTTGTCA GCGAGGAGTA TCCGAGGCGG GGTTGGTTCA TGCACGAAAT GACGCACGTT
TGGCAACATC AACGAGGATA TGCCGTGCGC TGGCATGCGC TTACCGTGAC GATTCGCGGC
GAGAGCGCGT ATCGGTACGA AATCGAGCCC GGGCAAGTCT TCAGCGATTT CAATATGGAG
CAGCAAGGCA ATCTTGTATC AGACTACTTT GCGCTCGTTG TCGTGGACAA TCGAGGTGAA
TTGATTCATG CGCAACCAGG AAGCAAGAAT CAACTTCGCC AAGTGCTGGC CCCACTTCTA
CAGGATCCCA AGGATGCATC GAATCTTCCG AAATAG
 
Protein sequence
MDLVAALTGY SQTTRHIRID TAMPGAFVVE RFHGREGVNE SFRFEIDVLS SEPFLDLTPL 
IGHAARLRLA TGAGERSWNG YVTHAAYADS DGEITRYRLT MESWLALLRL RRNCLYFVDV
DTKDICERVF GDYPQARWRY ELKEPLRKFS LRGQYRETDD TFVLRQLAEA GLSFRIEHAQ
DAGKEASGDH TVVVFDRRAP FRHGSTIAYN LQDVGDPDGV ITQFSERHQM VPDRVVATSW
KADELLALAG HAQQPPEDKA PVLPVREIYD GQRAGRFDTI DDAQRFAEQR LDALRLPKRI
HYGAGSSRTL EIGAVHTLAG YLDRAITFVP LSIEHEAVNN LGADIGALLG RGELDKGLYR
NRFVAVPDGT PIVPPHRDRP IVHGVQTAIV VGEAGSRVSS TRDHQVRVQF PWMRGTAPLP
GGLTDTASRS NPAGHAPGDH RSGVLARVAE SSAGPNFGHA FTPRVGAEVV IGFESGNIDM
PVVLGQVYGG RVQPPFAAGE GSDANHPGTL TGLQTQTLDG QSGSRWVMDD AAGQLRHELS
NSTANSRLAQ GYLIDQQGAM RGAYRGEGFE LATDGWGVVR AGEGVLVSST ARRLATSTQM
DVAQSVGQLK QAVRTAQGMS ESAAAAHAGG LAANAAQADF LKAIDPAQDG KYTGAVNGQS
ATKASGAQRD GGEPVERFAA PAVLMESPEN IVLTTPHSAV SYAAQHVHLT AQRDAHVAAA
ATVAAASGDA VSLYAAAGGL RAIASDGPVS VEAHTSTMEI LADQSVRITS TDDRIDVLAK
DAIVLQQGPN RITLKGGDIT VETPGQFLVK SGAHPFPGPA AQSVSLPPLP IPAPLALFDE
QIRFVNEDGE PLGNVAYQLK LADGSTVSGV TDDNGRTERV STDEPTAIQS ATLTPTQVVD
CCGRTSDVPP PAVKVDIKGV GTHDTLVGSS EQSVTVKGES RPLTDGEIEM AKTVFQDSID
YSAVRVHKGS YFWFNLQSKR TAVTPNNTMY FREEDFVEDF SVVSEEYPRR GWFMHEMTHV
WQHQRGYAVR WHALTVTIRG ESAYRYEIEP GQVFSDFNME QQGNLVSDYF ALVVVDNRGE
LIHAQPGSKN QLRQVLAPLL QDPKDASNLP K