| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1601 |
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| Symbol | |
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| ID | 4900354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1551397 |
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| End bp | 1553298 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640134831 |
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| Product | hypothetical protein |
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| Protein accession | YP_001065872 |
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| Protein GI | 126454611 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTCGG CATCGGCCGC CGGCGTGCGC AGGCACTTTC GAGAACCGCT GATGGATGAA
CTCCTCTCAT ACTACGAACG GGAACTGGCG TTCCTGCGCC GCCACGTGCG CGATTTCGCC
GAGCGCTATC CGAAGATCGC GAGCCGCATG CAGCTCGCGA GCGGCGCGGA CGGCAGCAGC
GAGGATCCCC AGGTCGAGCG GCTGTTCGAA TCATTCGCGC TGACGGGCGC GCGCGCGTCG
CGGCACATCG ACGACGACTA CTCCGAGTTC ACGAAGGCGT TCGTCGAGGT GCTGTACCCG
CATTATCTGC GCGTGTTCCC GTCGTGCTCG ATCGCGTCGT TCGACATCGA TGCGAGCCGC
GCCGCGCAGA TGTCGGCGGC CGTGGTCGTG CCGCGCGGCA CGCAGCTGTA CAGCCGGCCC
GTGAGGGGCG CGAAGCTGTT CTTCCGCACC GCGTACGACG TGACGCTGTC GCCGCTGCAA
CTGACGGCCG CGCGCTTTCA CGCGATGCCG CAGGCGCCGC GTTCGTTCCG GCTGCCGCCG
AACGCGAGCG CGCAGCTCTC GCTGTCGTTC GCGATCCGCT CGCCGCACGC GAGCGTCGCC
GATCTGAAGC TCGATTCCGT TCGCCTGTAC ACGCGCGGCG AGCCGCTGAT GAGCGCCGCG
CTGCGCGACG CGCTGTCGAT TCATGCATTG CAGGCGTACG TCGAGCCGGA GCAGGGCGGG
CGCTGGGTGG CGCTCGAGCG CGTGCCCTTC GCGGCCGTCG GCGTGTCGCG CGAGGACAGC
CTGATTCCTT GCCCGCAGGG TGTGCATCCC GCGTATCCGC TGCTGACCGA GTATTTCGCC
TTTGCCGAGA AATTCGGCTT CTTCGATTGC GATCTGCGCG AGGCCGGGCG CCTCGGCAGG
CGGCACTTCA CGCTTCATCT GCTGCTCAAG GGCATCCCGG CCGATTCCGC GAAGGCGGGC
GTGCTCGAAT CGCTGAGCGC CGAGCACGTG CTGCTCGGCT GCACGCCGGT GATCAATCTG
TTCGAGACGA CAGGCAAGCT CGGCCAGCAG CCGAGCGCCG CGTCGGGCGC GCACATGCAG
CCGCTCGTCG TCGACAAGCA GAATGCCTAT GCATACGAAG TCTATTCGGT CGATGCGGTG
ACGCAGGTCC AGGAGACGCC GCAGGGCGAG CGCGTCACGA CGTTCCCGTC GCTGCATTCG
CTGTACCACG GCGGGCAGGC GGCGCGGGCG TCGCTGTACT GGCGCATGCG GCGCGACGCG
CTTGTCGCGA GAAGCGAGCC GGGGCACGAG CTGTCGCTCG GCTTCGTCGA CGGCGCGCTC
GATCCGGTCG CGGCGCCGGC CGGCCTCGAT TTCAAGCTCA CATGCAGCAA CCGCGATTTG
CCGGAGCATC TGCCGCACGG CGCGCCGGGC GGCGATCTGA TGATGGAAGG CGGCACGCTC
GCGAGCCGGA TCGGCCTGTT GCAGCGGCCC ACGCGGCCGC TGCGCTTGCG CGAGGATCGC
GGCGTGCTGT GGCGTCTCGT GTCGCAGCTC TCGTCGAACT CGCTGTTGCT CGCCGGCGGC
GCCGGCGCCG TGCGTGACCT GCTCGGGCTG CACGACGTGC AGGAGTCGCC CGCGACCGTG
CGTCAGATCG CGGGCATCGT CGACGTGTCG CAGAAGCCCG TGACCGCGTG GGTATCCGAG
AAGCCGTTCG CGAGCGTCGT GCGGGGGCTC GAGATTCGCA TCACGGTCGA CGAAGAGTGC
TTCGCGGGCA CGGGTGTCCA CACCTTCGCG CAACTGATGG ATTGCCTGTT GAGCCGATAC
GTCGCGCCGA ACGGCTTCAC GCAGCTCGTG CTCGTGTCGA GCCGAACCGG CGACGTGCTG
TGCACGTGCG CGCGTCGCGC GGGCGGCGGA TTCCTGATCT AG
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| Protein sequence | MSSASAAGVR RHFREPLMDE LLSYYERELA FLRRHVRDFA ERYPKIASRM QLASGADGSS
EDPQVERLFE SFALTGARAS RHIDDDYSEF TKAFVEVLYP HYLRVFPSCS IASFDIDASR
AAQMSAAVVV PRGTQLYSRP VRGAKLFFRT AYDVTLSPLQ LTAARFHAMP QAPRSFRLPP
NASAQLSLSF AIRSPHASVA DLKLDSVRLY TRGEPLMSAA LRDALSIHAL QAYVEPEQGG
RWVALERVPF AAVGVSREDS LIPCPQGVHP AYPLLTEYFA FAEKFGFFDC DLREAGRLGR
RHFTLHLLLK GIPADSAKAG VLESLSAEHV LLGCTPVINL FETTGKLGQQ PSAASGAHMQ
PLVVDKQNAY AYEVYSVDAV TQVQETPQGE RVTTFPSLHS LYHGGQAARA SLYWRMRRDA
LVARSEPGHE LSLGFVDGAL DPVAAPAGLD FKLTCSNRDL PEHLPHGAPG GDLMMEGGTL
ASRIGLLQRP TRPLRLREDR GVLWRLVSQL SSNSLLLAGG AGAVRDLLGL HDVQESPATV
RQIAGIVDVS QKPVTAWVSE KPFASVVRGL EIRITVDEEC FAGTGVHTFA QLMDCLLSRY
VAPNGFTQLV LVSSRTGDVL CTCARRAGGG FLI
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