| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1565 |
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| Symbol | glgX |
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| ID | 4902411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1516151 |
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| End bp | 1518259 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640134795 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001065836 |
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| Protein GI | 126454362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.122779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACAC CCACGCCCGA TCGCCTCGAA CCGGGGCGCA GCTATCCGCT CGGCGCGCAC
TGGGACGGGC TCGGCGTGAA CTTCGCGGTA TTTTCCGCGC ACGCCCGCCG GGTTCAGCTC
TGCCTGTTCG ATCCGACCGG ACGCCGCGAG ATCGCGCGCC TCGATCTGCC CGAATGCACG
GACGAAATCT GGCACGGCTA CCTGCCCGAC GCGCATCCGG GCACGGTCTA CGCGTTCCGC
GCGGACGGCG CGTACGAGCC GCAGCACGGG CACCGCTTCA ATCCGCACAA GCTGCTGCTC
GATCCGTACG CGCGTAAGCT CGTCGGGCAG TTTCGCTGGT CCGACGCGCT GTTCGGCTAC
CGGCTGCATT CGAGTCGCGC GGACTTGTCG ATCGACCGGC GCGATTCGGC GCCCGCGATG
CCGAAATGCG TGGTCGTCGA CGAGGCCGTC GACTGGAGCA CCGACCGCCG CCCGTGCGTG
CCGTGGCGCG ATACGGTGAT CTACGAAGCC CACGTGCGCG GCGTGTCGAT GCGGCGCGCC
GAGCTGCGCG CGCCGGAACG GGGCACGTTC GCCGCGCTCG CCTGCCCCGC GTTCATCGAT
CACCTGCTCG CACTCGGCGT GACGAGCGTC GAGCTGCTGC CGGTGCACGC GTTCATGCAC
GCGCGCGCGC TCGTCAATCT CGGGCTGTGC AACTACTGGG GCTACGACAC CGCCGCGTTC
TTCGCGCCCG AGCCCTCGTA TCTCGCGACG CGCCGGCTCG ACGAGATGCG CATCGCGATC
CGCCAGTTGC ACGCGGCGGG CATCGAAGTG CTGCTCGACG TCGTCTACAA CCATACGTGC
GAGGGCAATC AGCTCGGCCC GACGATCTGC TGGCGCGGCC TCGACAACGC GAGCTACTAC
CGGCTCGCGC CGGACGACCC GCGCCGCCAC ATCGACGAGA CGGGCTGCGG CAACACGCTC
GACCTGTCGC ACCCGCGCGT GCTGCAGATG GTGATGGATT CGCTGCGCTA CTGGTCGAAC
GCGTTCAACG TCGACGGCTT TCGCTTCGAT CTCTGCGCGA CGCTCGGCCG CGAGGCGGCC
GGCTTCGATC CGGGCGCGGG CTTTTTCGAC GCGCTGCGTC AGGACCCCGT GCTCGCCACG
CGCAAGCTGA TCGCCGAGCC GTGGGACGTC GGCCCGGGCG GCTATCAGCT CGGCCGCCAT
CCGGCCGGCT TCGCCGAGTG GAACGACCGC TTTCGCGACA CCGTGCGGCG CTTCTGGCGC
GGCGACGCCG GCATGCGGCC GGAGCTCGCC GCGCGGCTCG CGGGCTCGGC CGACCTGTTC
AACCACCACG GGCGGCGGAC CTGGTCGACC GTGAACTTCG TCGCCGCGCA CGACGGCTTC
ACGCTTGCCG ATCTCGTCTC ATACGCGGCC AAGCACAACG ACGCGAACGG CGAAGACAAC
CGCGACGGGC GCGACGACAA CTGCAGCGCG AACTGGGGCG CCGAGGGGCC CACCGAAGAC
AGACAGGTGC GGGCCGTGCG CGCGCGCGTC GCGCGCTCGC TGCTCACGAC GCTGTTCGCC
GCGCTCGGCA CGCCGATGCT GCTCGGCGGC GACGAGTTCG GGCGCACGCA GCAGGGCAAC
AACAACGCGT ATTGCCAGGA TAACGAACTG TCGTGGTTCG ACTGGAGCGC GGCCGAATCG
GCGGACGGCC GCACGATGAT TCACTTCGTC GGCCGGCTCG CGGCGCTGCG GCGCGCGTAT
CCGGTGCTGT CCGAGCCGCG CTATCCGTCG GGCGAGCGCG ACGGCGCGCC CGGCTTGCAC
GAGATCGACT GGTTCGACGA GCGCGGAGAC GCGCTGACGG TGCCCGCCTG GCACGACCGC
GAGCGGCGCG CGCTGACGAT GCGGCGGGTC GGCAACGGAC GCGCGGGGCG GCCGGAGGCG
TTGCTGCTGA TGCTGAACGC GTCGTCCGAC GCGATCGTGT TCCATGCGCC GCCGCCCTCG
CTCGTCTACC GCATTCTGCT CGACAGCGCG GCGCCCGACG CGGCGCCGCG GCTGATGCCC
GCCGACGGCG TCGAGATCGC CGCGCACGCC GCGGTGATCG CGGCGGCGTC GGTGCCCGAG
GCCGGCTGA
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| Protein sequence | MPTPTPDRLE PGRSYPLGAH WDGLGVNFAV FSAHARRVQL CLFDPTGRRE IARLDLPECT
DEIWHGYLPD AHPGTVYAFR ADGAYEPQHG HRFNPHKLLL DPYARKLVGQ FRWSDALFGY
RLHSSRADLS IDRRDSAPAM PKCVVVDEAV DWSTDRRPCV PWRDTVIYEA HVRGVSMRRA
ELRAPERGTF AALACPAFID HLLALGVTSV ELLPVHAFMH ARALVNLGLC NYWGYDTAAF
FAPEPSYLAT RRLDEMRIAI RQLHAAGIEV LLDVVYNHTC EGNQLGPTIC WRGLDNASYY
RLAPDDPRRH IDETGCGNTL DLSHPRVLQM VMDSLRYWSN AFNVDGFRFD LCATLGREAA
GFDPGAGFFD ALRQDPVLAT RKLIAEPWDV GPGGYQLGRH PAGFAEWNDR FRDTVRRFWR
GDAGMRPELA ARLAGSADLF NHHGRRTWST VNFVAAHDGF TLADLVSYAA KHNDANGEDN
RDGRDDNCSA NWGAEGPTED RQVRAVRARV ARSLLTTLFA ALGTPMLLGG DEFGRTQQGN
NNAYCQDNEL SWFDWSAAES ADGRTMIHFV GRLAALRRAY PVLSEPRYPS GERDGAPGLH
EIDWFDERGD ALTVPAWHDR ERRALTMRRV GNGRAGRPEA LLLMLNASSD AIVFHAPPPS
LVYRILLDSA APDAAPRLMP ADGVEIAAHA AVIAAASVPE AG
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