Gene BURPS1106A_1564 details

Gene Information

• Locus tag: BURPS1106A_1564
• Symbol: treZ
• ID: 4899423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 1514220
• End bp: 1516124
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 640134794
• Product: malto-oligosyltrehalose trehalohydrolase
• Protein accession: YP_001065835
• Protein GI: 126452473
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR02402] malto-oligosyltrehalose trehalohydrolase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0166062
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGATT CGACCGCCAC GCATGCGTAT GCGCTGCCCT TCGGCGCGAC GTGCGTCGAC 
GCGCGGCACA CGCGCTTTCA CCTCTGGGCG CCCGCCTGCC GCAGCGCCGC CGTCGAACGG 
CAAGACGGCG AGACCGTCGC GATGACGCCC GACGGCGGCG GCGGCTTCGA CGCGATCGTG 
CGATGCGGGC CCGGCACGCT GTACCGCTAC CTGCTCGACG GCACGCTGCG CGTGCCCGAT 
CCCGCGTCGC GCTTCCAGCC GCACGGCGTG CACGGCCCGA GCGAGGTCGT CGATCCGGCC 
GCCTACCGCT GGCGCCACGA CGACTGGCGC GGACGGCCGT GGCGCGAAAC CGTGCTGTAC 
GAGGTGCACG TCGGCGCGTT CGGCGGCTAT GCGCGGATCG CGCGCCGGCT CCCGGCGCTC 
GCCGCGCTCG GCATCACCGC GATCGAGCTG ATGCCCGTCA ACGCGTTCCC CGGCGCGCGC 
AACTGGGGCT ACGACGGCGT GCTGCCGTTC GCGCCCGACG CATCCTACGG GCCGCCCGAC 
GCGCTGAAGT CGCTCGTCGA CGCCGCGCAC GGGCTCGGGC TTCAGGTGCT GCTCGACGTC 
GTCTACAACC ACTTCGGCCC CGACGGCAAC CTGCTGCCCC GCTACGCGCC CGCGTTCTTC 
CGCCGCGACC GCGATACCGC ATGGGGGCCG GCCATCGATT TCTCGTGCCC GCAGGCGGGC 
GCGTTCTTTC TCGAGAACGC GCTGTACTGG CTCGACGAAT ACCGGTTCGA CGGACTGCGG 
ATCGACGCCG CGCACGCGAT CGACGACGAC GCGTGGCTCG CCGGCCTCGC CCGCCGCGTG 
CGCGCCTACG CGGGCGACGC GCGCCACGTG CATCTCGTGC TCGAAAACGA ACGCAACACC 
GCGAGCCTGC TCGCCGGCGG CCGCTTCGAC GCGCAATGGA ACGACGATTT CCACAACAGC 
ATGCACGTGC TGCTGACGGG CGAGCAGGCG GGCTACTACC GCGCGTATGC CGACGCGCCG 
ATCCGCCACC TCGCGCGCGT GCTCGGCGAA GGTTTCGCGT ATCAGGGCGA GCCGTCGCCG 
CTGCACGGCG GCGCACCGCG CGGCGAACCG AGCGCGGACC TGCCGCCGAG CGCGTTCGTC 
GCGTTCCTGC AGAACCACGA TCAGATCGGC AACCGCGCAT TCGGCGAGCG GCTGCGCGCG 
CTCGTGAACG ACGACGCGCT GCGCGCGGCG AGCGCGCTCG CGCTGCTTGC GCCGCAGATT 
CCGCTGCTGT TCATGGGCGA GGAATGCGGC ACGACGCAAC CGTTCCAGTT CTTCACCGAT 
CATCGCGGCG CGCTCGCCGC AGCGGTGCGC GAAGGCCGCC GCCGCGAATT CGCCGCCTTC 
CCCGCGTTCG CCGATCCCGC CCATCGCGAC GCGATTCCCG ACCCGAACGA CCCGGCGACG 
TTCGCCCGCT CGTCGCTCGC CGCGCCGGGC GCCGAGCCGC CCGACGCGAA CGCGTGGCGG 
CGCTTCTACC GCGGCGCGCT CGCCGTGCGC GCGCGCTTCG TCACGCCGTG GCTCGACGGC 
GCGCGCGCGC TCGGTGCGAC GGTGCTCGCG CGCGCGGACG GCGGCCACGC GAACGCGCTC 
GTCGCGCGCT GGCGCCTCGG CGACGGCAAC ACGCTCGCGA TCGCGTTGAA TCTGGACGCC 
CGGCCGGCCG CGCTCGCCGC GCCGCCCGAC GGCAAGATCG TGTTCGAGAC TCCGCCGCGC 
GCACGCGACG CGCTCGCCGA CGCACGGCTC GCCGCGCACG CGTGCATTGC CTGGCGCAGC 
GGGAACGTGA ACGGCGTCGC GCGGCGCGGC CGCGCCGTCG ACGCGAAGCA CATGCCGGCC 
GTGAAGCACG CGAACGGCGT GAACGGCCAG GACGGCGCGC CATGA 

 

Protein sequence

MNDSTATHAY ALPFGATCVD ARHTRFHLWA PACRSAAVER QDGETVAMTP DGGGGFDAIV 
RCGPGTLYRY LLDGTLRVPD PASRFQPHGV HGPSEVVDPA AYRWRHDDWR GRPWRETVLY 
EVHVGAFGGY ARIARRLPAL AALGITAIEL MPVNAFPGAR NWGYDGVLPF APDASYGPPD 
ALKSLVDAAH GLGLQVLLDV VYNHFGPDGN LLPRYAPAFF RRDRDTAWGP AIDFSCPQAG 
AFFLENALYW LDEYRFDGLR IDAAHAIDDD AWLAGLARRV RAYAGDARHV HLVLENERNT 
ASLLAGGRFD AQWNDDFHNS MHVLLTGEQA GYYRAYADAP IRHLARVLGE GFAYQGEPSP 
LHGGAPRGEP SADLPPSAFV AFLQNHDQIG NRAFGERLRA LVNDDALRAA SALALLAPQI 
PLLFMGEECG TTQPFQFFTD HRGALAAAVR EGRRREFAAF PAFADPAHRD AIPDPNDPAT 
FARSSLAAPG AEPPDANAWR RFYRGALAVR ARFVTPWLDG ARALGATVLA RADGGHANAL 
VARWRLGDGN TLAIALNLDA RPAALAAPPD GKIVFETPPR ARDALADARL AAHACIAWRS 
GNVNGVARRG RAVDAKHMPA VKHANGVNGQ DGAP