| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1503 |
|---|
| Symbol | |
|---|
| ID | 4902348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 1458709 |
|---|
| End bp | 1459731 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640134733 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001065776 |
|---|
| Protein GI | 126454909 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.369518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCCA AGCTCGCCCA CTGGGATTTC GTCCGGCCTG TCGCGACGAC GCGCGTGCTC
GTCGACGTGG GCGTCGAGCA GGGGCTCGCC GTCGGACAGT GCCTGGGCGG CAGCGGTGTC
TGCGCCGATC TGCTCGACAA GCCGGACGCC ACCGTCGCCG CCGTGCAGGA ACTGCGCATC
GTTCGCAATC TGATGCGGCT GCTGGGGCCG GACTTTCCGC TCGGCATCGA GATCGGCCGG
CGCTATCACG CGACCGCCTA TGGCGTCTGG GGTTTCGCGC TGATGAGCAG CGCGACGTTC
GGCGACGCCG TGTCGGTCGG CTTGCGCTAT CTTCAATTGA CGTCGACCTT CTGCGAGATC
CGGCCGACGC TGCGCGGCGA CGACGCGACG CTCGTGATCG ACGACCGCGA CCTGCCCGGC
GACGTGCGCG ACGTGCTGGT CGAAATCACG GTGGCCGCGT TGATCACGCT GCAATTCGAT
CTCGACGCGG CGAACTTGCC GGTCAAGCGT CTGGCGCTCA AGATGAAGCC GCCGTCGTAC
GCCGGCCGCT TCCGGACGCT GTTCGACGCG ACGCCCGAAT TCGGCGCGGC GCACAATGCG
CTGACGGTGG ACGCGCGCTG TCTCGACCTG AAGCTGCCGC AGCGCAACGC GCTGACGCGG
CGGCGGTGCG AGGACGAGTG CCGCCGCGTG CTCGAGCGCC ATCGTCGCTG CGAAGGCTGG
GCGGGGCGCG TGCGCCGGCA GTTGGCCGGC GATCCGGCGC GCGGCCCGAC GATGGACGTG
CTCGCGGCCG AACTGGGCGT GAGCCCGCGC ACATTGCGGC GGCGGCTCGC GAACGAGGGG
ACGGATTACG AGACGGTCGT CGACGAGCTT CGCCAAGCGC TGGCCGAGGC GCTGCTCGCG
ACGACGACGT TGACGCTCGC CGAGGTGTCG GAGCGGCTCG GCTATTCGGA GCCATCCGCG
TTCGCGCGCG CGTTCAGGCG CTGGAAGGGG ATGTCGCCGA GCGAATACCG GCGCGCGGCG
TGA
|
|---|
| Protein sequence | MTAKLAHWDF VRPVATTRVL VDVGVEQGLA VGQCLGGSGV CADLLDKPDA TVAAVQELRI
VRNLMRLLGP DFPLGIEIGR RYHATAYGVW GFALMSSATF GDAVSVGLRY LQLTSTFCEI
RPTLRGDDAT LVIDDRDLPG DVRDVLVEIT VAALITLQFD LDAANLPVKR LALKMKPPSY
AGRFRTLFDA TPEFGAAHNA LTVDARCLDL KLPQRNALTR RRCEDECRRV LERHRRCEGW
AGRVRRQLAG DPARGPTMDV LAAELGVSPR TLRRRLANEG TDYETVVDEL RQALAEALLA
TTTLTLAEVS ERLGYSEPSA FARAFRRWKG MSPSEYRRAA
|
|---|
| |