| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1476 |
|---|
| Symbol | |
|---|
| ID | 4900041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 1433843 |
|---|
| End bp | 1434919 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640134706 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001065749 |
|---|
| Protein GI | 126453413 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.119295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTC GGCGCGCAGG CGGTTTTTTT GCGACGGGCA GGCGCGCGCG GGCGGCCGCG
CGCGTGCGGC GGCGGCCGGA CGGACTCGGC GCGTCGCGCA GCCAGGGTGG TTCGATGCGA
CAATCGTGCG CACATTCGAA CATCTTGGAG ACCCCGCCCA TGAAGATTCA GCGGATCGCC
GTCGTCGGCG CCGGCGTGAT CGGCGCGAGC TGGACCGCGT TCTATTTGTC GAAGGGCTTC
GACGTCGCCG TGACCGATCC CGCGCCCGGC GCGCGCGAGC GGCTCGACGC CGCGCTTGCG
AATTTTCTAG GCGAGCGCGC CGGCACGCTC GCGTCGCGCG TGGCGTTCGA GCCGACGCTC
GACGCCGCGC TCGAAGGCGC GGACTTCGTG CAGGAGAACG GCCCCGAGCG TCTCGATTTC
AAGCGCGAGC TGTATCGCCG GATCGACGCG CGCCTGCCCG CGCACGTGCT CGTCGCATCG
AGCTCGTCCG GGCTCAAGAT GTCCGATATC CAGACCGCGT GCGACGCGCA TCCGCAGCGC
TGCCTCGTCG CGCATCCGTT CAATCCGCCG CACCTGATTC CGCTCGTCGA ACTCGTCGGC
GGCGCAGCGA CGTCGGCCGA CGCGATCGCG CGGGCGAAGC GCTTCTACGA CAGCCTCGGC
AAGGTGACGA TCGTGCTCAA CAAGGAGAGG GCGGGCCACG TCGCGAACCG GCTCGCGGCC
GCGCTCTTTC GCGAGGTGTA TTACCTGGTG GGCGAAGGCG TCGTGAGCGT CGAGGACGCG
GACAAGGCGG TGTCGTGGGG GCCCGGCCTG CGTTGGGGGC TGATGGGGCA GAGCCTCGTC
TACCACCTCG GCGGCGGAGA GGGCGGCATC GCGCATTTCC TCGAGCACCT GTCGGGCCCG
ATGGCGAGCT GGTGGAACGA CCTCGGCGCG CCGTCGTTCT CGCCCGACGT CGATCGCCAA
CTGATCGACG CGCTGCGCGA GATCCAGGGC GCGCATTCGA TGCGCGAGCT CGGCGCGGAG
CGCGACCGTC TGCTCGTCGA GCTGATCGAC GCACGGCGCA ACAGCTTTCT GCCGTAG
|
|---|
| Protein sequence | MTLRRAGGFF ATGRRARAAA RVRRRPDGLG ASRSQGGSMR QSCAHSNILE TPPMKIQRIA
VVGAGVIGAS WTAFYLSKGF DVAVTDPAPG ARERLDAALA NFLGERAGTL ASRVAFEPTL
DAALEGADFV QENGPERLDF KRELYRRIDA RLPAHVLVAS SSSGLKMSDI QTACDAHPQR
CLVAHPFNPP HLIPLVELVG GAATSADAIA RAKRFYDSLG KVTIVLNKER AGHVANRLAA
ALFREVYYLV GEGVVSVEDA DKAVSWGPGL RWGLMGQSLV YHLGGGEGGI AHFLEHLSGP
MASWWNDLGA PSFSPDVDRQ LIDALREIQG AHSMRELGAE RDRLLVELID ARRNSFLP
|
|---|
| |