Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1458 |
Symbol | glmS |
ID | 4902055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1415735 |
End bp | 1417666 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640134688 |
Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
Protein accession | YP_001065731 |
Protein GI | 126454525 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTGGAA TTGTCGGCGC GGTGGCGCGG CGCGATGTCG TGCCCAACCT GGTGGACGGG CTGAAGCGGC TCGAATACCG CGGCTACGAT TCGTGCGGCG TGGTCGTCTA TCAGGACCGG CGGCTCGTGC GGGCGCGCAG CGTCGATCGC GTCGCGGCAT TGCAGCGCGA GATCTCGGCC CGCGCGTTGT CGGGCTACAC GGGTATCGCG CACACGCGCT GGGCGACGCA CGGCGCGCCC GTGACGGCCA ACGCGCATCC GCATTTTTCG TCGGGCGTCG CTACGTCGGG CGTCGCTACG CCGGGCGTCG CTACGTCGGG CGCACCGGCG GCGAGCGCCG CCGCGTCCGG CGGCACCGCG CAGGCCGACG CGTCACCCGA AGCCCGCGCG CGGATCGCGC TGTCGCACAA CGGCATCATC GAGAACTACG AGGCGCTGCG CGCGGACCTC GAGCGGCACG GCTACGCGTT CGCGAGCCAG ACCGACAGCG AGGCGATCGC GCATCTCGTC GATCATCTGT ACGACGGCGA CCTGTTCGAC GCGGTGCGGC GCGCGCTCGC GCGGCTGCGC GGCAGTTACG CGATCGCGGT GATGTGCCGC GACGAGCCGC ACCGGATCGT CGGCGCGCGC GACGGGATGC CGCTCGTCGT CGGCATCGGC GACGGCGAGC ACTTCCTCGC GTCGGACGCG ATCGCGCTGT CGAACCTCAC CGACCGGATC GCGTATCTCG AGAACGGCGA CGTCGTCGAT ATCCAGCTGC ACCGCCACTG GATCGTCGAC GCGAGCGGGC GGCGCGTCGA GCGGACGGTG CACACGATCG CCGCGCATGT GGCGGCGGCC GATCTCGGCG GCTATCGCTA CTACATGCAA AAGGAGATCT TCGAGCAGCC GCGCGCGGTC GCCGATACGC TGCTCGACGT CACGTCGATC ATGCCCGAGC TGTTCGGCGA TCGCGCATGG CGCGCGCTGA GCGCGGCGGA CTCGGTGCTG CTGCTCGCGT GCGGCGGCAG TTATCACGCG GCGCTCACCG CGAAATACTG GATCGAGAGC ATCGCCGGCC TGCCGGCGAA CGTCGAGATC GCGAGCGAGT TCCGCTATCG CGACGGCGTG CCGAATCCGA AGGCGCTCGT CGTCGCGGTG TCGCAAAGCG GCGAGACGGC CGACGTGCTC GGCGCGGTGC ACGCGGCGAA GCGGCTCGGC ATGCCGAACA CGCTCGCGAT CTGCAACGTG CCGACGAGCG CGCTCGTGCG CGAATGCGCG TCGAGCTTCA TCACGCGGGC CGGCATCGAG GTGGGCGTCG CGTCGACGAA GGCGTTCACG ACGCAGCTCG TCGCGCTGTT CCTGTTGACG CTCGCGCTCG CGCAGGTGCG CGCGCGCTTG TCCGACGAAG ACGAGAAGCG GCATCTGCAC GCGCTGCGCC ACCTGCCCGA GGCGATGAGC AAGGTGCTCG CGCTCGAGCC GCGGATCATC GCGTGGTCCG AGCGGCTCGC GCGGCGCGAG AACATGCTGT TCCTCGGCCG CGGGATGCAT TATCCGATCG CGCTCGAAGG CGCGCTGAAG ATGAAGGAGA TCTCGTACAT CCACGCGGAG GCGTACGCGG CGGGCGAATT GAAGCACGGC CCGCTCGCGC TCGTGAGCGA CGAGATGCCC GTCATCGCGG TCGCGCCGAA CGACCGGCTG CTCGAGAAGC TGCGCTCGAA CATGCACGAG GTGAGCGCGC GCAACGGCCG GCTCTTCGTG TTCGCCGACG TCGATTGCGC GATCGCGAGC GCGCCGGGCC TCGACGTGAT TCGCCTCACC GAATACTACG GGCCGCTCTC GCCGATCCTG CATGCGGTTC CGATGCAACT GCTCGCGTTC CACGCGGCGC TCACGCGCGG CACCGATATC GACAAGCCGC GCAATCTCGC GAAATCCGTG ACGGTCGAGT GA
|
Protein sequence | MCGIVGAVAR RDVVPNLVDG LKRLEYRGYD SCGVVVYQDR RLVRARSVDR VAALQREISA RALSGYTGIA HTRWATHGAP VTANAHPHFS SGVATSGVAT PGVATSGAPA ASAAASGGTA QADASPEARA RIALSHNGII ENYEALRADL ERHGYAFASQ TDSEAIAHLV DHLYDGDLFD AVRRALARLR GSYAIAVMCR DEPHRIVGAR DGMPLVVGIG DGEHFLASDA IALSNLTDRI AYLENGDVVD IQLHRHWIVD ASGRRVERTV HTIAAHVAAA DLGGYRYYMQ KEIFEQPRAV ADTLLDVTSI MPELFGDRAW RALSAADSVL LLACGGSYHA ALTAKYWIES IAGLPANVEI ASEFRYRDGV PNPKALVVAV SQSGETADVL GAVHAAKRLG MPNTLAICNV PTSALVRECA SSFITRAGIE VGVASTKAFT TQLVALFLLT LALAQVRARL SDEDEKRHLH ALRHLPEAMS KVLALEPRII AWSERLARRE NMLFLGRGMH YPIALEGALK MKEISYIHAE AYAAGELKHG PLALVSDEMP VIAVAPNDRL LEKLRSNMHE VSARNGRLFV FADVDCAIAS APGLDVIRLT EYYGPLSPIL HAVPMQLLAF HAALTRGTDI DKPRNLAKSV TVE
|
| |