Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1449 |
Symbol | |
ID | 4901018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1408578 |
End bp | 1409978 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640134679 |
Product | diguanylate cyclase |
Protein accession | YP_001065722 |
Protein GI | 126454383 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACCG TCTTCACAGC CCATGAATCG CCGCGTGTGA TCGGCACGAT CGCCCGGCTC TACACCGCGT GCCTGCTGAT CGGCTTCGCG CTCGTGCCGG CGTTCCTGAT CGCCTATGTG CGGTTCTTCA TCGATCCGCG GCTCGTCTTC GAGAACCATC AGTTCCACGA ACTGGCGATC GCCGCCGCGA CGCTCGAGGG GCTGTTCGTC ACCTACGTCA CATGGCGCTG CTATCTGGCG TCGGGCGAGC CGCTGCTGCG CTGGCTCACG CTCGGCTTCC TCGGCTTCGC GCTGATCTAT TCGCTGCACG GCGCGTTCAC CGGCATGGCG CACCAGAACA TCTGGCTGTT CCTGCTGTAC GGGCCCGCAT CGCGCCTCGT GATGTCGATC CTGCTGCTCG TCGGGCAACT GTCGTACTTC CGCGACGCCG ATCCACCGGA GCGCCGCACG CATCTGTCGA TGTGGCTGCC GTGGATCGCC GGCTACGTCG TCGTGTGCTT CGCCGTGGCC GCGATCGCGT ATTCGCCGAT CGCCGGCCAT CTGTGGACGC GCGCATCGAT GGAGGGCGGC GCGATGATCG TGTCGCTCGT CAACGTCGCG CTGCTGCTCG TGCGGCGCAT CCGCACGCCG CTGATGCTCG TCTACGGCAT CTCGGTGACG TCGTTCGCGC TGTCGTCGAT CGCGTTCATT CTCGGCAAGC CGTGGAATCA CATGTGGTGG CTCGCGCACG CGGTCTTCGC GGGCGGCTTC TTCATGCTGA GCTTCGGCGT CGTGCAGGCG CTGATGACGA CCCGCTCGTT CGCGACCGTC TACAGCCAGC AGGACTTGAT GGCGCGGCTC GCCGAATCGA TGGCGCGCAC CGAGGGCGTG CTGCAGGAGC TCAAGCGCAC CAATCAGAAG CTCGAGCACC TCGCGACCAC CGATCCGCTG ACGGGCGCGT CCAACCGGCG CAAGTTCATC GAGCAGATGC AATCGGAGAT CGCGCGCGCG AAACGCGACG GCACCGCGTT CTCGCTGCTC GCGCTCGATC TCGACAACTT CAAGACGATC AACGACAACT ACGGCCATCA GGTCGGCGAC GTCGTGCTGC GCAATTTCGT GCGCCAGTGC CTCGCCGCGA TTCGCCCTTA CGACCACATC GCGCGCGTCG GCGGCGAGGA ATTCATGGTG CTGCTGCCGC GCATGCTCGC CGACACGGCG AGCGGCATCG CCGAGCGGGT GCGGACCACG ATCGCGAACG CATCGTTCGG CATCGACGGC AAGCACACGC CCGTGACCGT GAGCATCGGC GTGTCGCAGT ACGGGCGCGA TGGCGACACC GTCGACGAAA TCCTGAGCGC CGCCGACAAG CTGCTCTATC GCGCGAAGAA CGAGGGGCGC AATCGCGTCG TCGCGTCGTA G
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Protein sequence | MSTVFTAHES PRVIGTIARL YTACLLIGFA LVPAFLIAYV RFFIDPRLVF ENHQFHELAI AAATLEGLFV TYVTWRCYLA SGEPLLRWLT LGFLGFALIY SLHGAFTGMA HQNIWLFLLY GPASRLVMSI LLLVGQLSYF RDADPPERRT HLSMWLPWIA GYVVVCFAVA AIAYSPIAGH LWTRASMEGG AMIVSLVNVA LLLVRRIRTP LMLVYGISVT SFALSSIAFI LGKPWNHMWW LAHAVFAGGF FMLSFGVVQA LMTTRSFATV YSQQDLMARL AESMARTEGV LQELKRTNQK LEHLATTDPL TGASNRRKFI EQMQSEIARA KRDGTAFSLL ALDLDNFKTI NDNYGHQVGD VVLRNFVRQC LAAIRPYDHI ARVGGEEFMV LLPRMLADTA SGIAERVRTT IANASFGIDG KHTPVTVSIG VSQYGRDGDT VDEILSAADK LLYRAKNEGR NRVVAS
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