Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1369 |
Symbol | mdtA |
ID | 4901203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1343127 |
End bp | 1344464 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640134599 |
Product | membrane fusion protein MdtA |
Protein accession | YP_001065642 |
Protein GI | 126452619 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAATC AAGAAAAGCC CACGCACCGC TCTCCCGCTC CCGCGCCCTC CGGTCCCCGC CCGCGCCGCC CGCGCCGCAG GCTGATCGCA TTCGGCGTGC TCGCGGCCGT CGCGATCGGC GCCCTGCTGT GGTGGCATCC GTGGAAGAGC GGCGGCACCC CGAGCGCCCA GGGCCAGCCG GGCGGCGCGC GCAAGCGGGG CGGCCCCGCC GCGCTCGCGA ACCTGCCGCA GCCGGTGCAG GTCGCCACGG CGGCGCGCGG CGAGATGCCC GTCGTCCTCA ACGCGCTCGG CACCGTCACG CCGCTCGCGA ACGTGACCGT CCGGACCCAG TTGTCCGGCT ATCTGCAGGC GGTGTCGTTC CAGGAAGGCC AGATCGTGAA GAAGGGCGAC GTGCTCGCGC AAATCGATCC GCGCCCGTAC CAGATCTCGC TCGCGAACGC GCAAGGCGCG CTCGCGCGCG ACGAGGCGCT CCTCGCGACC GCGCGCCTCG ACCTGAAGCG CTATCAGACG CTCGTCGCGC AAGACTCGAT CGCGAAGCAG ACGGCCGACA CGCAGGCCTC GCTCGTCAAG CAGTACGAAG GCACCGTGCA GATCGACCGC GCGGCGATCG ACTCCGCGAA GCTCAATCTC GCGTACGCGC GCATCACCGC GCCCGTGTCG GGCCGCGTCG GCCTGCGGCA GGTGGACCCG GGCAATTACG TGACGCCGTC GGACACGAAC GGCATCGTCG TCATCACGCA ACTGCAGCCG ATGAGCGTGA TCTTCACCAC GTCGGAGGAC AATCTGCCCG CGATCCTCAA GCAGGTGGGC GCGGGCGGCA AGCTGTCGGT CACCGCGTAC AACCGCAACA ACACGACGCC GCTCGAGACG GGCGTGCTCG ACACGCTCGA CAACCAGATC GACACGGCCA CCGGCACCGT GAAGCTGCGC GCTCGCTTCG AGAACCGGAA CAACCTGCTG TTCCCGAATC AGTTCGTCAA CACGCGGCTG CTCGTCGACA CGATCCGCGA TGCGACGATC GTGCCGACGT CGGCCGTGCT CACGGGCTCG ATCGGCCAGT TCGTCTACGT CGTGAAGCCG GACAACACGG TGAGCGTGCG CAAGGTGAAG CCCGGCCCCA TCGACGGCGA GCGCACGAGC ATCGTCGAGG GGCTCGCCGT CGGCGAGCGC GTCGTGACGG ACGGCTCCGA CCGGTTGCGC GAAGGCTCGG CGGTGACGAT CCCGGCCGAC AAGCCGAAGC AGGCTTCGGG CGCAAGAAGC GCTTCAGGCG CTTCGGACGC TTCGGACGCG CACGGCGGGC ACCGTCGCCG CGGCGCGTCG CAAGCCCGAT CGCAATGA
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Protein sequence | MDNQEKPTHR SPAPAPSGPR PRRPRRRLIA FGVLAAVAIG ALLWWHPWKS GGTPSAQGQP GGARKRGGPA ALANLPQPVQ VATAARGEMP VVLNALGTVT PLANVTVRTQ LSGYLQAVSF QEGQIVKKGD VLAQIDPRPY QISLANAQGA LARDEALLAT ARLDLKRYQT LVAQDSIAKQ TADTQASLVK QYEGTVQIDR AAIDSAKLNL AYARITAPVS GRVGLRQVDP GNYVTPSDTN GIVVITQLQP MSVIFTTSED NLPAILKQVG AGGKLSVTAY NRNNTTPLET GVLDTLDNQI DTATGTVKLR ARFENRNNLL FPNQFVNTRL LVDTIRDATI VPTSAVLTGS IGQFVYVVKP DNTVSVRKVK PGPIDGERTS IVEGLAVGER VVTDGSDRLR EGSAVTIPAD KPKQASGARS ASGASDASDA HGGHRRRGAS QARSQ
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