| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1368 |
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| Symbol | mdtB |
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| ID | 4903211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1340003 |
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| End bp | 1343113 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640134598 |
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| Product | multidrug resistance protein MdtB |
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| Protein accession | YP_001065641 |
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| Protein GI | 126455284 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGT CCCGCGTCTT CATTCTCCGG CCGGTCGGCA CCGCGCTCCT GATGGCGGCG
ATCATGCTCG CCGGCCTCGT CGCGCTGCGC TTCCTGCCGC TCGCGGCGCT GCCCGAAGTC
GACTATCCGA CGATCCAGGT CCAGACCTTC TATCCGGGCG CGAGCCCCGA GGTGATGACG
TCGTCCGTCA CCGCGCCGCT CGAGCGTCAG TTCGGGCAGA TGCCGTCGCT CAACCAGATG
TCGTCGCAAA GCTCGGCGGG CGCGTCGGTG ATCACGCTGC AGTTCAGCCT CGATCTGCCG
CTCGACATCG CCGAGCAGGA AGTGCAGGCG GCCATCAACG CGGCGGGCAA CCTGCTGCCG
TCGGACCTGC CCGCGCCGCC CATCTACGCG AAGGTCAACC CGGCCGACGC GCCCGTGATC
ACGCTCGCCG TCACGTCGAA GACGCTGCCG CTCACGCAGG TGCAGGATCT CGCGGACACG
CGCCTCGCGA TGAAGATCTC GCAGGTGTCG GGCGTCGGCC TCGTCAGCCT GTCGGGCGGC
AACCGGCCGG CCGTGCGGAT CCAGGCGAAC CCGCTCGCGC TCGCGTCGTA CGGCCTGAAC
CTCGACGATC TGCGCACGAC GATCTCGAAC CTGAACGTCA ACACGCCGAA GGGCAACTTC
GACGGCCCGA CGCGCGCGTA CACGATCAAC GCGAACGATC AGCTGACGAG CGCCGACCAG
TACAACGACG CCGTCGTCGC GTACAAGAAC GGCCGGCCGG TGATGCTCAC CGATGTCGCG
AAGATCGTCG CCGGCTCGGA GAACACGAAG CTCGGCGCGT GGGTCGACGC CGAGCCCGCG
ATCATCCTGA ACGTGCAGCG GCAGCCGGGC GCGAACGTGA TTCAAACGGT CGACAACGTC
AAGGCGATCC TGCCGAAGCT GCAGGAATCG CTGCCCGCCG CGCTCGACGT GCAGATCGTC
ACCGATCGCA CGACGATGAT CCGCGCCGCC GTGCGCGACG TGCAGTTCGA GCTCGGGCTC
GCGGTCGCGC TCGTCGTGCT CGTCATGTAC CTGTTCCTCG CGAACGTCTA CGCGACGATC
ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACCTGTCG
GGCTTTTCGC TGAACAACCT GTCGCTGATG GCGCTCACGA TCGCCACGGG CTTCGTCGTC
GACGACGCGA TCGTGATGAT CGAGAACATC GCGCGCTACG TCGAGGAAGG CGACTCCGCG
CTCGAAGCGG CGTTAAAGGG CTCCAAGCAG ATCGGCTTCA CGATCATCTC GCTCACCGTG
TCGCTGATCG CCGTGCTGAT TCCGCTGCTG TTCATGGGCG ACGTCGTCGG GCGGCTGTTC
CACGAGTTCG CTATCACGCT CGCGGTGACG ATCGTGATCT CGGCTGTCGT GTCGCTCACG
CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCACACGC CGCCGCCCGA GAGCCACCGC
TTCGAGGCGA AGGTGCACGG GCTGATCGAG CGCGTGATCG AGCGCTACGG CGTCGCGCTG
CAATGGGTGC TCGACCGGCA GCGCGCGACG CTCGTCGTCG CGGTGCTCAC GCTCGCGCTC
ACCGCGCTGC TCTACGCCGT GATTCCGAAG GGCTTCTTCC CGACGCAGGA CACGGGCGTG
ATCCAGGCGA TCACGCAGGC GCCGCAATCG GTGTCGTACG GCGCGATGGC CGAGCGGCAG
CAGGCGCTCG CCGCCGAGAT CCTGAAGCAT CCGGACGTCG TGAGCCTCAC GTCGTTCATC
GGCGTCGACG GCGCGAACAT CACGCTCAAC AGCGGCCGCA TGCTGATCAA CCTGAAGCCG
CGCGACGAGC GCAGCGAATC GGCGAGCGAC GTGATCCGCT CGCTGCAGCG GCAGGTCGCG
AACGTCACGG GCATCTCGCT GTACATGCAG CCGGTGCAGG ATCTGACGAT CGACTCGACG
GTCAGCCCGA CGCAATATCA GTTCATGCTG ACGAGCCCGA ATCCGGACGA GTTCGCGACC
TGGGTGCCGA AGCTCGTCGA CCGGCTGAAG AAGGAGCCCT CGCTTGCCGA CGTCGCCACC
GATCTGCAGA ACAGCGGCAA GTCGGTCTAC ATCGAGATCG ACCGCACGAG CGCCGCGCGC
TTCGGGATCA CGCCGGCGAC CGTCGACAAC GCGCTCTACG ACGCGTACGG CCAGCGGATC
GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TCCTCGAATC GGAACCGCAG
ATGCAGCACT ACACCGATTC GCTCAACGGC ATCTACCTGC CGTCGGCGGG CGGCGGGCAG
GTGCCGCTGT CCGCGATCGC GACGTTCCGC GAGCGGCCCG CGCCGCTGCT CGTGTCGCAC
CTGTCGCAGT TCCCGGCCAC GACGATCTCG TTTAACCTCG CGCCGGGCGC GTCGCTCGGC
GAGGCGGTGA AGGCGATCGA CGCGGCCGAG CGCGAGCTCG GGCTGCCGGC GTCGTTCCAG
ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCATCGC TGTCGAACCA GCTGTTCCTG
ATCCTCGCCG CGATCGTCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC
CATCCGATCA CGATCCTCTC GACGCTGCCG TCGGCGGGTG TCGGCGCGCT GCTCGCGCTG
ATGATCACCG GGCACGATCT CGACATCATC GGGATCATCG GCATCGTGCT GCTCATCGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA GCGCGTCGAG
GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCGTGCCTGC TGCGCTTCCG GCCGATCCTG
ATGACGACGC TCGCCGCGCT GCTCGGCGCC GTGCCGCTCA TCGTCGGCTC GGGCGCGGGC
TCCGAGCTGC GCCAGCCGCT CGGCATCGCG ATCGCGGGCG GGCTCATCGT GTCGCAGGTG
CTCACGCTCT TCACGACGCC CGTGATCTAT CTCGGCTTCG ATGCGCTCGC CCGCCGCGTG
CGCGGCTTCT TCGAGCGCTC CGGCGGCACG GCCGCGCATC CGGACGCGTA A
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| Protein sequence | MNPSRVFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT
SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP
SDLPAPPIYA KVNPADAPVI TLAVTSKTLP LTQVQDLADT RLAMKISQVS GVGLVSLSGG
NRPAVRIQAN PLALASYGLN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ
YNDAVVAYKN GRPVMLTDVA KIVAGSENTK LGAWVDAEPA IILNVQRQPG ANVIQTVDNV
KAILPKLQES LPAALDVQIV TDRTTMIRAA VRDVQFELGL AVALVVLVMY LFLANVYATI
IPSLSVPLSL IGTLAVMYLS GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGDSA
LEAALKGSKQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAVVSLT
LVPMMCAKLL RHTPPPESHR FEAKVHGLIE RVIERYGVAL QWVLDRQRAT LVVAVLTLAL
TALLYAVIPK GFFPTQDTGV IQAITQAPQS VSYGAMAERQ QALAAEILKH PDVVSLTSFI
GVDGANITLN SGRMLINLKP RDERSESASD VIRSLQRQVA NVTGISLYMQ PVQDLTIDST
VSPTQYQFML TSPNPDEFAT WVPKLVDRLK KEPSLADVAT DLQNSGKSVY IEIDRTSAAR
FGITPATVDN ALYDAYGQRI VSTIFTQSNQ YRVILESEPQ MQHYTDSLNG IYLPSAGGGQ
VPLSAIATFR ERPAPLLVSH LSQFPATTIS FNLAPGASLG EAVKAIDAAE RELGLPASFQ
TRFQGAALAF QASLSNQLFL ILAAIVTMYI VLGVLYESYI HPITILSTLP SAGVGALLAL
MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL
MTTLAALLGA VPLIVGSGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDALARRV
RGFFERSGGT AAHPDA
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