| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1345 |
|---|
| Symbol | serA |
|---|
| ID | 4899941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 1316716 |
|---|
| End bp | 1317990 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640134575 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_001065618 |
|---|
| Protein GI | 126454274 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGT ACGCGTACCG CGCCGGAATT TCCGGCCTCC GTTACGATTC GACCACCACG
CTGGGTAACA TGACTTCCGT TCTTCTCCTC GAAAACATTC ACGACAGCGC GTCGCGGCAT
TTCGCCGACG CGAACGTCGA CATCGAGCGG CGCAAGGGCG CGCTCGCCGG CGCCGAATTG
CGGCGCGCGC TGCAGCAGCA TCAACTAATC GGCATTCGCT CGGCGACGCA TCTGCTGCGC
GACGAGATCG ACGCCGCGCG CCATCTGCTC GCGATCGGGT GCTTCTGCAT CGGCACGTCG
CAGGTGGATT TGCCGGCCGC CGCGCATCAC GGCATTCCGG TGTTCAACGC GCCGTTCTCG
AATACGCGGT CGGTCGCGGA GCTCGTGATC GCCGAGGCCA TTCTGTTGCT GCGGCGCGTG
CCGGAGAAGA GCGTCCTCGC GCATGCGGGC GAATGGGCGA AGGGCGCGGG CGGATCGTTC
GAGGCGCGCG GCAAGACGAT CGCGATCGTC GGCTACGGCA ACATCGGCGC GCAGGTCGGC
GTGCTCGCCG AAGCGCTCGG CATGAGGGTC GTCTATTACG ATGTGCAGGC GAAGCTGTCG
CTCGGCTCCG CGCAGCCGGC GCGCTCGCTC GGTGAGGCGA TCGCGCTCGC GGACGTCGTC
ACGCTGCACG TGCCCGCACA CGCGTCGACG CACAACATGA TCGACGCGAG CGTCCTCGCG
CAATTCAAAT CGAATGCAAT CCTGATCAAT GCGTCGCGCG GCACCGTCGT CGATATCGAC
GCGCTGCGCG ACGCGCTCGT GCAGAAGCGC CTGAGCGGCG CGGCGATCGA CGTGTTTCCG
CGCGAGCCGA AGACCAATGC GGACCGTTTC GAATCGGTGC TGCAAGGATT GCCGAACGTG
ATCCTCACGC CGCATATCGG CGGCAGCACG CAGGAAGCGC AGGAGAACAT CGGCGAAGAG
GTGTCGTCGA AGCTCGTCGC ATTCCTCACG CGCGGCGATA CCGCGGGCGC CGTCAATTTT
CCGCAGGTGA GCCCGGGCGA ATGCACGTCG GCCGCGCGGC TCCTGAACGT GCACGGCAAT
ACGCCGGGCG TGCTCGCGGT GCTCAACACG CTGCTTGCTC AGGATGGCGC GAACATCGTC
GCGCAGCATC TGCAGACGCG CGGCGATATC GGCTATGTCG TGACCGACTT GGACCGCGTG
CCGTCCGATG CGTTTCTCGA CACGCTGAGC GGCAATCGCG CATTCACGCG CAGCCGCTTG
CTGCGCAGCG CATGA
|
|---|
| Protein sequence | MAAYAYRAGI SGLRYDSTTT LGNMTSVLLL ENIHDSASRH FADANVDIER RKGALAGAEL
RRALQQHQLI GIRSATHLLR DEIDAARHLL AIGCFCIGTS QVDLPAAAHH GIPVFNAPFS
NTRSVAELVI AEAILLLRRV PEKSVLAHAG EWAKGAGGSF EARGKTIAIV GYGNIGAQVG
VLAEALGMRV VYYDVQAKLS LGSAQPARSL GEAIALADVV TLHVPAHAST HNMIDASVLA
QFKSNAILIN ASRGTVVDID ALRDALVQKR LSGAAIDVFP REPKTNADRF ESVLQGLPNV
ILTPHIGGST QEAQENIGEE VSSKLVAFLT RGDTAGAVNF PQVSPGECTS AARLLNVHGN
TPGVLAVLNT LLAQDGANIV AQHLQTRGDI GYVVTDLDRV PSDAFLDTLS GNRAFTRSRL
LRSA
|
|---|
| |