Gene BURPS1106A_1301 details

Gene Information

• Locus tag: BURPS1106A_1301
• Symbol: nuoC
• ID: 4900730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 1271914
• End bp: 1272516
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640134531
• Product: NADH dehydrogenase subunit C
• Protein accession: YP_001065579
• Protein GI: 126454408
• COG category: [C] Energy production and conversion
• COG ID: [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGCA AAATCGAGAC CCTCAAGGCG AACCTCGAAG CCGCGCTCGG CGCGCGCGCG 
GTGAGCCTCG TCGAAGCGGT TGGCGAGCTC ACGCTCGTCG TGAAGGCGAG CGATTACCTC 
GAGGTCGCGA AGCAGTTGCG CGACGATCGC TCGCTCGGCT TCGAGCAGTT GATCGACCTC 
TGCGGCGTCG ACTATCAAAC CTATGGCGAC GGCGCCTACG ACGGCCCGCG TTTCGCCGCC 
GTCCTGCACC TGCTGTCGGT CGCGAACAAC TGGCGCCTGC GCGTGCGCGT GTTCGCCTCC 
GACGACGATC TGCCGATCGT GCCGTCCGTC GTCGATATCT GGAATTCCGC GAACTGGTAC 
GAGCGCGAAG CGTTCGACCT CTACGGCATC GTGTTCGAAG GCCACCCCGA CCTGCGCCGC 
ATCCTGACCG ACTACGGCTT TATCGGTCAT CCGTTCCGCA AGGATTTCCC GGTTTCCGGC 
TACGTCGAAA TGCGTTACGA CCCGCAAGAG AAGCGCGTCG TGTACCAGCC GGTGACGATC 
GAGCCGCGCG AAATCACGCC GCGCGTGATC CGCGAGGATC GCTATGGCGG TCTGAAACAT 
TAA 

 

Protein sequence

MASKIETLKA NLEAALGARA VSLVEAVGEL TLVVKASDYL EVAKQLRDDR SLGFEQLIDL 
CGVDYQTYGD GAYDGPRFAA VLHLLSVANN WRLRVRVFAS DDDLPIVPSV VDIWNSANWY 
EREAFDLYGI VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPQE KRVVYQPVTI 
EPREITPRVI REDRYGGLKH