Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1284 |
Symbol | psd |
ID | 4903092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1256952 |
End bp | 1257602 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640134514 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_001065563 |
Protein GI | 126453211 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATC CTCATCCGAT CATCGCGCGC GAAGGCTGGC CGTTCATCGC AATCGCGGCC GTCGTCGCGC TGTTGATCCA CGCCGTCGGC GGGTTCGGCC TCGCATGGCC GTTCTGGCTG CTGCTCGTCT TCGTGGTCCA GTTCTTCCGC GATCCGCCGC GCGCCATTCC GACGCAGGCG AACGCGGTGC TGTGTCCGGC CGACGGCCGT ATCGTCGCCG TCGAGACGGC GCACGATCCG TACGCGGATC GCGAAGCGCT GAAGATCAGC GTGTTCATGA ACGTGTTCAA TGTGCACTCG CAGCGCTCGC CCGTCGACGG CGCGGTGCAG AAGGTCGAGT ATTTTCCGGG CGCGTTCCTG AATGCCGCGC TCGACAAGGC GTCGGCCGAG AACGAGCGCA ACGCGGTCGT GATCCAGACG GGCGCGGGGC ATACCGTGAC GGCCGTGCAG ATCGCGGGCC TCGTCGCGCG CCGGATTCTC TGTTACGTGC GCGCGGGCGA GCCGCTGTCG CGCGGGCAGC GCTACGGTTT CATCCGCTTC GGCTCGCGCG TCGACGTTTA TTTGCCGAAG GGCAGCCGAG CACGCGTGTC GATCGGCGAG AAGGTGTCTG CATCGTCGAC GATCCTCGCC GAGCTGCCCG AACAACCGTA A
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Protein sequence | MNYPHPIIAR EGWPFIAIAA VVALLIHAVG GFGLAWPFWL LLVFVVQFFR DPPRAIPTQA NAVLCPADGR IVAVETAHDP YADREALKIS VFMNVFNVHS QRSPVDGAVQ KVEYFPGAFL NAALDKASAE NERNAVVIQT GAGHTVTAVQ IAGLVARRIL CYVRAGEPLS RGQRYGFIRF GSRVDVYLPK GSRARVSIGE KVSASSTILA ELPEQP
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