| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1279 |
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| Symbol | |
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| ID | 4900010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1252409 |
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| End bp | 1252969 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640134509 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001065558 |
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| Protein GI | 126455327 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAG ACAAGGAACT CGCGGACTTT CTGGCGGGCG TCGAAAGGCG CGCGTTCAAG
CAGGCTGCAT ACGCGGTGCG CGACGACGAC GCGTCGCTCG ACATCGTGCA GGACGCGATG
ATCCGGCTCG CGGAAAAATA CGGCGACCGC CCGGCCGCCG AATTGCCGCT GCTTTTTCAA
CGGATCCTTC AGAACGCGAT CCACGATTAT TTCCGCAGAC AAAAGGTGCG CAACACCTGG
GTCAGCCTGT TCTCGTCGCT GAACAACACC GACGACGACG AGTTCGACCC GCTCGAGACG
CTCGAATCGG CGGACGGCGA CGGCGTCGAG AGCGGGGAGA CGCGGCTCGA GCGCGAGCAG
GTGCTCGCCC TCATCGACGA TGAAATCCAG AAGCTTCCGG CGCGTCAACG GGAAGCCTTC
CTGATGCGTT ATTGGGAGGA TATGGATGTC GCCGAGACAG CCGCCGCCAT GGGGTGCTCC
GAAGGCAGCG TCAAGACGCA CTGCTCCCGG GCCACTCACG CATTGGCGTT GGCGCTCAAG
GCCAAAGGAA TCACGCTATG A
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| Protein sequence | MASDKELADF LAGVERRAFK QAAYAVRDDD ASLDIVQDAM IRLAEKYGDR PAAELPLLFQ
RILQNAIHDY FRRQKVRNTW VSLFSSLNNT DDDEFDPLET LESADGDGVE SGETRLEREQ
VLALIDDEIQ KLPARQREAF LMRYWEDMDV AETAAAMGCS EGSVKTHCSR ATHALALALK
AKGITL
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