Gene BURPS1106A_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1259 
Symbol 
ID4900533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1234663 
End bp1237305 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content74% 
IMG OID640134489 
Productefflux ABC transporter, permease protein 
Protein accessionYP_001065538 
Protein GI126452428 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.356208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGGCGG CGGGCAAAGC GAGGCCGGCC GGCCGCCGTT TCGGCCTCGT CGATCTGCTG 
CGGCAGGCCG GGCGGATGAC GCTGCGCGAC TGGCGCGCGG GCGAGTTGAC GCTCGTCGCG
CTCGCGCTCG TGCTTGCCGT CGCGGCGCTC ACGAGCGTCG GCTTTCTCGC CGATAGGCTG
CGCCAGGGGC TCGAGCGCGA CGCACGCCGG ATGCTCGGCG CGGATTTCGT CGTGCGGGCC
GATCATCCGG TCGATCCGGC GTTCGCGCAC GAGGCGCGAA CGCTCGGCCT CGCGACCGCG
ACGACCGCGG TCTTTCCCAG CATGGTGGGC GCGGCCAAGC CGGCCGATTC AGCCGATTCA
GCCGGTTCAG CCAAGGCCGG CACGCCCGCG CCGTCCGCCG CGGCGGACGG CGCGGGCAGC
TCGCCGCCCG TGCGGCTCGC GGCCGTGAAG GCGGTGTCGG CCGGCTATCC GCTGCGCGGC
GCGGTCGAGA TCGCGCCCGA GGCGAACGCG CCCGGCCGCG CCGCCGGCTC GATTCCAGCC
TCGGGCACGG TGTGGGTCGA TCCGTCGCTG CTCGACGCGC TCCATTTGAA GGTCGGCGAC
GCGCTGCGCG TCGGCGGCCG CACGTTCACG ATCGGCGCGG CGATCACCCG CGAGCTCGAC
CGCGGCTTCT CGTTCGTCAA TTTCTCGCCG CGCGTGATGC TGCGCGCGGA CGAGCTCGAA
TCGACGGGGC TCACGGGCTA CGGCAGCCGC GTCACGTACC GGCTCCTCGT CGCGGGCGAC
GATGCGGCCG TCGAGCGCTT CGCGCGCTAC GCGCATGCGC GCGTCGACGG CGGCAAGCTG
CGCGGCGTCG CGCTCGAATC GCTGCAGGAA GGCCAGCCGC AGGTGCGGCA GACGCTCGAC
CGCGCGCGCC ATTTCCTCAC GCTCGTCGCG CTGTTGACCG CGCTGCTCGC GGCCGTCGCG
ATCGCGATGG CCGCGCAGCG CTACATGCGC CGCCATCTCG ACGGCTGCGC GGCGATGCGC
TGCCTCGGCG CGAGCCGGCG CACGCTGTCG GCGCTGTTCG CGATCGAATT CGCGCTGCTC
GGGCTCGCGG GCGGCGCGGC GGGCGCGGCG CTCGGCTACG TCGGCCATCT CGTGCTGCTG
CGCGCGCTCG GCAGCCTGAT CGACGTCGTG CTGCCGCCGC CTTCGGCATG GCCGGCGGCG
ATCGGCGTCG GAACCGGGCT CGTGCTGCTG CTCGGCTTCG CGCTGCCGCC GCTCGCGCCG
TTGACGCGCG TGCCGCCGGT GCGCGTGCTG CGCCGCGAAT GGGGCGACGC CGGCCGCGTC
GCGTGGGTCG GCTACGCGAT GGGCATCGCG CTCTTCGCGG CGCTGTTGAT CGCGGCGGCG
GGCAACCTGA CGCTCGGCGC GATCGTCGCG GGCGGCTTCG CGGGCAGCCT CGTGCTGTTC
GCGCTCATCG CGCGGCTCGC GCTCGTCGCG CTCGCGCGGC TCGTGCGCGA CGGCCGCGTC
GCGGCGGGGC TCGGCTGGCG CCACGCGCTC GCGTCGCTCG AGCGGCGCGG CGCGGCGAGC
GCGCTGCAGA TCACCGCGCT CGCGCTCGGT CTGATGTGCC TGCTGCTCAT CGCGATCACG
CGCAACGATC TCGTCGCCGG CTGGCGGCAG TCGACGCCGC CCGACGCGCC GAACCAGTTC
CTGATCGACA TCCAGCCCGA CCAGCGCGAC GACGTCGTCC GCTATCTCGC GGCGAACGGC
ATCGCCGATC CGGCGCTGTC GCCGATGGTG CGCGGGCGGC TCGTCGCGGT GAACGGCAAG
CCGGTGAATC CGGACGACTA CAAGCGCGAC GACGCGCGCC GCCTCGTCGA CCGCGAGTTC
AACCTCTCGT ACACGACACG GCTGCCCGAG GACAACCGGC TCGTCGCGGG CGACTGGTTC
GGCGCGTCGG GCGTGCCGCA GATCTCGATC GAGGCGGGGC TCGCGAAGAC GCTGGGCGTG
AAAACGGGCG ACACGCTGCG TTTCGACGTG ACGGGCCTCA CCGTCGACGC GCCGGTGACG
AGCGTGCGCA AGCTCGATTG GGGCACGTTC CGCGTGAACT TCTTCGTGCT GATGCCGCCC
GCGGCGCTGC GCGATTTTCC GGCCACCTAC ATCACGAGCT TCCATTTGCC CGCCGCGCGC
GAGCGCGTGC TCGACGGCCT GATCGCACGC TACCCGAACC TGACGGCGAT CGACGTCGGC
CCGATCCTCG CGCAGCTCGA GCGCGTGCTG CTGCAGGTGA TCGGCGCGGT GCAGTTCCTG
TTCGGCTTCA CGCTCGCGGC GGGTGTGCTC GTGCTGTATA CGGCGCTCGC CGGCTCGCGC
GACGAGCGCG TGCGCGAGGC CGCGCTGATG CGCGCGCTCG GCGCGTCGCG CAAGCAGGTC
GTCGCCGTGC AGCGCGCGGA GTTCGTCGTC GTCGGCGTGC TCGCGGGCGC GATGGCGGCG
GCGGGCGCGC TTGTGGTCGG CGCGGTGCTC GCGTCGCGCG TGTTCGATTT CCAGCTCGCG
CCCGACCCGT GGCTCGTACC GGCCGGCATC GCGGCGGGCG TCGCGTGCGC GGGCGCGGCG
GGGTGGCTCG GCCTGCGCGG CGTGCTGCGC CGGCCGGCGC TGCAATCGCT GCGCGATGCA
TGA
 
Protein sequence
MTAAGKARPA GRRFGLVDLL RQAGRMTLRD WRAGELTLVA LALVLAVAAL TSVGFLADRL 
RQGLERDARR MLGADFVVRA DHPVDPAFAH EARTLGLATA TTAVFPSMVG AAKPADSADS
AGSAKAGTPA PSAAADGAGS SPPVRLAAVK AVSAGYPLRG AVEIAPEANA PGRAAGSIPA
SGTVWVDPSL LDALHLKVGD ALRVGGRTFT IGAAITRELD RGFSFVNFSP RVMLRADELE
STGLTGYGSR VTYRLLVAGD DAAVERFARY AHARVDGGKL RGVALESLQE GQPQVRQTLD
RARHFLTLVA LLTALLAAVA IAMAAQRYMR RHLDGCAAMR CLGASRRTLS ALFAIEFALL
GLAGGAAGAA LGYVGHLVLL RALGSLIDVV LPPPSAWPAA IGVGTGLVLL LGFALPPLAP
LTRVPPVRVL RREWGDAGRV AWVGYAMGIA LFAALLIAAA GNLTLGAIVA GGFAGSLVLF
ALIARLALVA LARLVRDGRV AAGLGWRHAL ASLERRGAAS ALQITALALG LMCLLLIAIT
RNDLVAGWRQ STPPDAPNQF LIDIQPDQRD DVVRYLAANG IADPALSPMV RGRLVAVNGK
PVNPDDYKRD DARRLVDREF NLSYTTRLPE DNRLVAGDWF GASGVPQISI EAGLAKTLGV
KTGDTLRFDV TGLTVDAPVT SVRKLDWGTF RVNFFVLMPP AALRDFPATY ITSFHLPAAR
ERVLDGLIAR YPNLTAIDVG PILAQLERVL LQVIGAVQFL FGFTLAAGVL VLYTALAGSR
DERVREAALM RALGASRKQV VAVQRAEFVV VGVLAGAMAA AGALVVGAVL ASRVFDFQLA
PDPWLVPAGI AAGVACAGAA GWLGLRGVLR RPALQSLRDA