Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1259 |
Symbol | |
ID | 4900533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1234663 |
End bp | 1237305 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640134489 |
Product | efflux ABC transporter, permease protein |
Protein accession | YP_001065538 |
Protein GI | 126452428 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.356208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGGCGG CGGGCAAAGC GAGGCCGGCC GGCCGCCGTT TCGGCCTCGT CGATCTGCTG CGGCAGGCCG GGCGGATGAC GCTGCGCGAC TGGCGCGCGG GCGAGTTGAC GCTCGTCGCG CTCGCGCTCG TGCTTGCCGT CGCGGCGCTC ACGAGCGTCG GCTTTCTCGC CGATAGGCTG CGCCAGGGGC TCGAGCGCGA CGCACGCCGG ATGCTCGGCG CGGATTTCGT CGTGCGGGCC GATCATCCGG TCGATCCGGC GTTCGCGCAC GAGGCGCGAA CGCTCGGCCT CGCGACCGCG ACGACCGCGG TCTTTCCCAG CATGGTGGGC GCGGCCAAGC CGGCCGATTC AGCCGATTCA GCCGGTTCAG CCAAGGCCGG CACGCCCGCG CCGTCCGCCG CGGCGGACGG CGCGGGCAGC TCGCCGCCCG TGCGGCTCGC GGCCGTGAAG GCGGTGTCGG CCGGCTATCC GCTGCGCGGC GCGGTCGAGA TCGCGCCCGA GGCGAACGCG CCCGGCCGCG CCGCCGGCTC GATTCCAGCC TCGGGCACGG TGTGGGTCGA TCCGTCGCTG CTCGACGCGC TCCATTTGAA GGTCGGCGAC GCGCTGCGCG TCGGCGGCCG CACGTTCACG ATCGGCGCGG CGATCACCCG CGAGCTCGAC CGCGGCTTCT CGTTCGTCAA TTTCTCGCCG CGCGTGATGC TGCGCGCGGA CGAGCTCGAA TCGACGGGGC TCACGGGCTA CGGCAGCCGC GTCACGTACC GGCTCCTCGT CGCGGGCGAC GATGCGGCCG TCGAGCGCTT CGCGCGCTAC GCGCATGCGC GCGTCGACGG CGGCAAGCTG CGCGGCGTCG CGCTCGAATC GCTGCAGGAA GGCCAGCCGC AGGTGCGGCA GACGCTCGAC CGCGCGCGCC ATTTCCTCAC GCTCGTCGCG CTGTTGACCG CGCTGCTCGC GGCCGTCGCG ATCGCGATGG CCGCGCAGCG CTACATGCGC CGCCATCTCG ACGGCTGCGC GGCGATGCGC TGCCTCGGCG CGAGCCGGCG CACGCTGTCG GCGCTGTTCG CGATCGAATT CGCGCTGCTC GGGCTCGCGG GCGGCGCGGC GGGCGCGGCG CTCGGCTACG TCGGCCATCT CGTGCTGCTG CGCGCGCTCG GCAGCCTGAT CGACGTCGTG CTGCCGCCGC CTTCGGCATG GCCGGCGGCG ATCGGCGTCG GAACCGGGCT CGTGCTGCTG CTCGGCTTCG CGCTGCCGCC GCTCGCGCCG TTGACGCGCG TGCCGCCGGT GCGCGTGCTG CGCCGCGAAT GGGGCGACGC CGGCCGCGTC GCGTGGGTCG GCTACGCGAT GGGCATCGCG CTCTTCGCGG CGCTGTTGAT CGCGGCGGCG GGCAACCTGA CGCTCGGCGC GATCGTCGCG GGCGGCTTCG CGGGCAGCCT CGTGCTGTTC GCGCTCATCG CGCGGCTCGC GCTCGTCGCG CTCGCGCGGC TCGTGCGCGA CGGCCGCGTC GCGGCGGGGC TCGGCTGGCG CCACGCGCTC GCGTCGCTCG AGCGGCGCGG CGCGGCGAGC GCGCTGCAGA TCACCGCGCT CGCGCTCGGT CTGATGTGCC TGCTGCTCAT CGCGATCACG CGCAACGATC TCGTCGCCGG CTGGCGGCAG TCGACGCCGC CCGACGCGCC GAACCAGTTC CTGATCGACA TCCAGCCCGA CCAGCGCGAC GACGTCGTCC GCTATCTCGC GGCGAACGGC ATCGCCGATC CGGCGCTGTC GCCGATGGTG CGCGGGCGGC TCGTCGCGGT GAACGGCAAG CCGGTGAATC CGGACGACTA CAAGCGCGAC GACGCGCGCC GCCTCGTCGA CCGCGAGTTC AACCTCTCGT ACACGACACG GCTGCCCGAG GACAACCGGC TCGTCGCGGG CGACTGGTTC GGCGCGTCGG GCGTGCCGCA GATCTCGATC GAGGCGGGGC TCGCGAAGAC GCTGGGCGTG AAAACGGGCG ACACGCTGCG TTTCGACGTG ACGGGCCTCA CCGTCGACGC GCCGGTGACG AGCGTGCGCA AGCTCGATTG GGGCACGTTC CGCGTGAACT TCTTCGTGCT GATGCCGCCC GCGGCGCTGC GCGATTTTCC GGCCACCTAC ATCACGAGCT TCCATTTGCC CGCCGCGCGC GAGCGCGTGC TCGACGGCCT GATCGCACGC TACCCGAACC TGACGGCGAT CGACGTCGGC CCGATCCTCG CGCAGCTCGA GCGCGTGCTG CTGCAGGTGA TCGGCGCGGT GCAGTTCCTG TTCGGCTTCA CGCTCGCGGC GGGTGTGCTC GTGCTGTATA CGGCGCTCGC CGGCTCGCGC GACGAGCGCG TGCGCGAGGC CGCGCTGATG CGCGCGCTCG GCGCGTCGCG CAAGCAGGTC GTCGCCGTGC AGCGCGCGGA GTTCGTCGTC GTCGGCGTGC TCGCGGGCGC GATGGCGGCG GCGGGCGCGC TTGTGGTCGG CGCGGTGCTC GCGTCGCGCG TGTTCGATTT CCAGCTCGCG CCCGACCCGT GGCTCGTACC GGCCGGCATC GCGGCGGGCG TCGCGTGCGC GGGCGCGGCG GGGTGGCTCG GCCTGCGCGG CGTGCTGCGC CGGCCGGCGC TGCAATCGCT GCGCGATGCA TGA
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Protein sequence | MTAAGKARPA GRRFGLVDLL RQAGRMTLRD WRAGELTLVA LALVLAVAAL TSVGFLADRL RQGLERDARR MLGADFVVRA DHPVDPAFAH EARTLGLATA TTAVFPSMVG AAKPADSADS AGSAKAGTPA PSAAADGAGS SPPVRLAAVK AVSAGYPLRG AVEIAPEANA PGRAAGSIPA SGTVWVDPSL LDALHLKVGD ALRVGGRTFT IGAAITRELD RGFSFVNFSP RVMLRADELE STGLTGYGSR VTYRLLVAGD DAAVERFARY AHARVDGGKL RGVALESLQE GQPQVRQTLD RARHFLTLVA LLTALLAAVA IAMAAQRYMR RHLDGCAAMR CLGASRRTLS ALFAIEFALL GLAGGAAGAA LGYVGHLVLL RALGSLIDVV LPPPSAWPAA IGVGTGLVLL LGFALPPLAP LTRVPPVRVL RREWGDAGRV AWVGYAMGIA LFAALLIAAA GNLTLGAIVA GGFAGSLVLF ALIARLALVA LARLVRDGRV AAGLGWRHAL ASLERRGAAS ALQITALALG LMCLLLIAIT RNDLVAGWRQ STPPDAPNQF LIDIQPDQRD DVVRYLAANG IADPALSPMV RGRLVAVNGK PVNPDDYKRD DARRLVDREF NLSYTTRLPE DNRLVAGDWF GASGVPQISI EAGLAKTLGV KTGDTLRFDV TGLTVDAPVT SVRKLDWGTF RVNFFVLMPP AALRDFPATY ITSFHLPAAR ERVLDGLIAR YPNLTAIDVG PILAQLERVL LQVIGAVQFL FGFTLAAGVL VLYTALAGSR DERVREAALM RALGASRKQV VAVQRAEFVV VGVLAGAMAA AGALVVGAVL ASRVFDFQLA PDPWLVPAGI AAGVACAGAA GWLGLRGVLR RPALQSLRDA
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