| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1238 |
|---|
| Symbol | hemF |
|---|
| ID | 4901356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1215600 |
|---|
| End bp | 1216523 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640134468 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001065517 |
|---|
| Protein GI | 126454604 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT CGACTTACGA CGTCAACCGA GTACGCGCTT ACCTGCAAGG GCTGCAGATG
CGCATCGCCG ATGCGCTCGG CGCCTTCGAC GGCACGCCGC TCGCCGCCGA CACGTGGCGG
CGCGGCCCCG GCGAGCGGCT GCGCGGCGGC GGCTGCACGC GCATTCTCGA GGCAGGCGGC
TTCTTCGAGC GCGCGGGCAT CGGCTTTTCC GACGTCGCGG GCGACGCGCT GCCGCCGTCG
GCGAGCGCAT CGCGCCCGCA GCTCGCCGGG CGCGGCTTCG AGGCGCTCGG CGTATCGCTC
GTGCTGCACC CGCGCAATCC GTACTGCCCG ACCGTCCACA TGAACGTGCG GATGCTGATC
GCGACGAAGC CGGGCGAGGC GCCCGTGTTC TGGTTCGGCG GCGGCATGGA TCTGACGCCG
ATTTACGGCT TCGAAGAGGA TGCACGGCAC TTCCACCGCA CGTGCCGCGC GGCGCTCGAG
CCGTTCGGCG CCGAGCTGTA CCCGCGCTTC AAGAAATGGT GCGACGACTA TTTCTTCCTG
AAACATCGCA ACGAGGCGCG CGGGATCGGC GGCATCTTCT TCGACGACTT CTCCGAGCTC
GGCTTCGAAC GCTCGTTCGA GATGCTGCAA AGCGTCGGCG ACGCGTTCCT GCCGTCGTAC
CTGCCGATCG TCGAGCGCCG CCGCGACACG CCGTACGGCG AGCGCGAGCG CGCGTTCCAG
GCATACCGGC GCGGCCGCTA CGTCGAGTTC AACCTGGTGT TCGACCGCGG CACGCTGTTC
GGGCTGCAAA GCGGCGGGCG CACCGAGTCC ATCCTGCTGT CGATGCCGCC GACGGCGGGC
TGGCGCTATG ACTGGCATCC GGACCCGGGC ACGCCCGAAG CACGCCTGCA AAGCGAGTTC
CTCGTGCCGC GCGACTGGGC ATGA
|
|---|
| Protein sequence | MTDSTYDVNR VRAYLQGLQM RIADALGAFD GTPLAADTWR RGPGERLRGG GCTRILEAGG
FFERAGIGFS DVAGDALPPS ASASRPQLAG RGFEALGVSL VLHPRNPYCP TVHMNVRMLI
ATKPGEAPVF WFGGGMDLTP IYGFEEDARH FHRTCRAALE PFGAELYPRF KKWCDDYFFL
KHRNEARGIG GIFFDDFSEL GFERSFEMLQ SVGDAFLPSY LPIVERRRDT PYGERERAFQ
AYRRGRYVEF NLVFDRGTLF GLQSGGRTES ILLSMPPTAG WRYDWHPDPG TPEARLQSEF
LVPRDWA
|
|---|
| |