Gene BURPS1106A_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1196 
SymbolpurT 
ID4899737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1177996 
End bp1179210 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID640134426 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_001065475 
Protein GI126452032 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.517415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG GTCAGCGGCT CGGCACGCCG CTTTCGCCGT CCGCCACGCG CGTCATGCTG 
CTCGGCGCGG GCGAGTTGGG CAAGGAAGTC ATCATCGCGT TGCAGCGGCT CGGCGTCGAA
GTGATCGCCG TCGACCGCTA TCCGAACGCA CCCGGCCATC AGGTCGCGCA TCGCGCGCAC
GTGATCGACA TGACGGACCC GGACGCGTTG CGCGCGCTCG TCGACGCGGA GCGTCCGCAT
CTCGTCGTGC CCGAAATCGA GGCGATCGCG ACCGACGCGC TCGCCGCGAT CGAGGCGGCC
GGCGTCTGCG AGGTGATCCC GACCGCGCGC GCGACGCAGC TCACGATGAA TCGCGAGGGC
ATTCGCCGGC TCGCGGCCGA GGAGCTCGGG CTGCCGACGT CGCCGTACGC GTTCGCGCAG
TCGTTCGACG AATTCGCGGC GGCCGTCGCG CGGATCGGCT TTCCGTGCGT CGTGAAGCCC
GTGATGTCGT CGTCGGGCAA GGGGCAGTCG GTCGTGAGAA GCGAGGCCGA CATCGAGCCC
GCGTGGCGCT ACGCGATGGC GGGCGGCCGC GTGAATCACG GCCGCGTGAT CGTCGAGGGC
TTCATCCGGT TCGATTACGA GATCACGCAG CTCACGGTGC GCGCGATCGA TCCGGCGAGC
GGGCAGACGC GCACCTCCTT CTGCGCGCCG ATCGGGCACC TGCAGGTGGC GGGCGACTAC
GTCGAATCGT GGCAGCCGCA GCCGATGAGC GCGAAGGCGC TCGAGCGCTC GCGCGACATC
GCGCATCGCG TGACGAGCGC GCTCGGCGGC CGCGGGATCT TCGGCGTCGA GCTGTTCGTG
CGCGGTGACG ATGTCTGGTT CTCCGAGGTG AGCCCGCGCC CGCACGACAC GGGGCTCGTG
ACGCTCGCGT CGCAGCGCCA GTCGGAGTTC GAGCTGCATG CGCGCGCGAT CCTCGGCCTG
CCGGTCGAGC CCGCGCTCGC GACGCCCGCC GCGTCGGCCG TGATCTACGG CGGGCTCGAC
GAAGCGGGCA TCGCGTTCGA GGGCGTGCGC GACGCGCTCG CGGTGCCGGG CGCCGATCTG
CGGCTGTTCG GCAAGCCCGA GAGCTTCGCG AAGCGCCGGA TGGGCGTCGC GCTCGCGACG
GGCGCGAACG TCGACGAAGC GCGCGAGCGC GCGAAGCGGG CCGCCGCCGC GGTGCGTCCG
GTGTCCGCGC GTTGA
 
Protein sequence
MQIGQRLGTP LSPSATRVML LGAGELGKEV IIALQRLGVE VIAVDRYPNA PGHQVAHRAH 
VIDMTDPDAL RALVDAERPH LVVPEIEAIA TDALAAIEAA GVCEVIPTAR ATQLTMNREG
IRRLAAEELG LPTSPYAFAQ SFDEFAAAVA RIGFPCVVKP VMSSSGKGQS VVRSEADIEP
AWRYAMAGGR VNHGRVIVEG FIRFDYEITQ LTVRAIDPAS GQTRTSFCAP IGHLQVAGDY
VESWQPQPMS AKALERSRDI AHRVTSALGG RGIFGVELFV RGDDVWFSEV SPRPHDTGLV
TLASQRQSEF ELHARAILGL PVEPALATPA ASAVIYGGLD EAGIAFEGVR DALAVPGADL
RLFGKPESFA KRRMGVALAT GANVDEARER AKRAAAAVRP VSAR