| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1186 |
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| Symbol | phaZ |
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| ID | 4900404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1165754 |
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| End bp | 1167220 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640134416 |
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| Product | intracellular poly[D(-)-3-hydroxybutyrate] (PHB) depolymerase |
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| Protein accession | YP_001065465 |
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| Protein GI | 126452644 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTACC AATTTCACGA ATTCCAGCGG GCGATGCTGA GCCCGCTGAC CGCCTGGGCA
CAAGCCGCGT CCAAATCGTT CGCGAACCCG TCGAGTCCGC TTTCGCTCGT ACCGGGCGCG
ACGCGCCTCG CGGCGGGCTA CGAACTGCTG TACCGGCTCG GCAAGGATTA CGAAAAGCCG
GAGTTCGGGA TTCACCAAAT CGTCAAGGAC GGACACAACA TTCCGATCGT CGAGCAGACG
ATCATCGAAA AGCCGTTCTG CCGGCTGCTG CGCTTCAAGC GCTACGCGGA CGATTCGGGC
GCCGTCGGGC AACTGAAGGA CGAGCCCGTC GTGCTCGTGT GCGCGCCGCT GTCGGGCCAC
CACGCCACGC TGCTGCGCGA CACGGTCCGC ACGCTGCTGC AGGACCACAA GGTCTACATC
ACCGACTGGA TCGACGCGCG GATGGTGCCC GCCGAAGTCG GCTCGTTTCA TCTCGACGAC
TACGTCGGCT ACATCCAGAA ATTCATCCGG CATATCGGCG CGCGCAACCT GCACGTGATC
TCGGTATGTC AGCCGACCGT GCCCGTGCTC GCGGCGATCT CGCTGATGGC GAGCCGCGGC
GAAGACACGC CGCTCACGAT GACGATGATG GGCGGGCCGA TCGACGCGCG CAAGAGCCCG
ACGTCGGTGA ATTCGCTCGC GACCAACCGC TCGCACTCGT GGTTCGAGAA CAACGTGATC
CACACGGTGC CGGCGAACTA TCCGGGCGAG GGTCGCAAGG TCTATCCGGG CTTCCTGCAG
CACACGGGCT TCGTCGCGAT GAACCCGGAG CGCCACGCGC AATCGCACTG GGACTTCTAC
CAGAGCCTGC TGCGCGGCGA CGAGGAAGAC GCCGAGGCAC ACCGCCGCTT CTACGACGAA
TACAACGCGG TGCTCGACAT GGCGGCCGAA TACTATCTGG ACACGATCCG CATCGTGTTC
CAGGAGTTCC GCCTCGCCGA GGGCACGTGG GACATCCACG GCGAGCGCGT GAAGCCGGCC
GATATCCATT CGACCGCGCT GATGACGATC GAGGGCGAAC TCGACGACAT CTCGGGCAGC
GGCCAGACGC ACGTCGCGCA CGAGCTGTGC ACGGGCATCG AACAGGCGCA CCGCCGCAGC
CTCACCGCCG AGAAGTGCGG CCACTACGGC ATTTTCTCGG GCCGCCGCTG GCGCACGATC
ATCTATCCGC AACTGCGCGA CTTCATCCGC GAGCACGCGT CGCAGCCGAA GAAGCCGACG
CCGCAGGCCG GTTCCACGCC CAACTCGCCT TCCACGCCGA GCCGATCGGC ATCGGGCAGC
GAAACGGCGA GCGCCGCGCC CGCGAAAGCG GCCGCGCTCA AGCTGAGCGC GAAGCGCACC
GCCGCCAAAA CCCGTGCGGC GAAGCCGCCC GCCGCCAAGC GCGGCGCAAT CAAGCTCGCC
GCGCCCCGCA CGCGCAAGGC CGCCTGA
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| Protein sequence | MLYQFHEFQR AMLSPLTAWA QAASKSFANP SSPLSLVPGA TRLAAGYELL YRLGKDYEKP
EFGIHQIVKD GHNIPIVEQT IIEKPFCRLL RFKRYADDSG AVGQLKDEPV VLVCAPLSGH
HATLLRDTVR TLLQDHKVYI TDWIDARMVP AEVGSFHLDD YVGYIQKFIR HIGARNLHVI
SVCQPTVPVL AAISLMASRG EDTPLTMTMM GGPIDARKSP TSVNSLATNR SHSWFENNVI
HTVPANYPGE GRKVYPGFLQ HTGFVAMNPE RHAQSHWDFY QSLLRGDEED AEAHRRFYDE
YNAVLDMAAE YYLDTIRIVF QEFRLAEGTW DIHGERVKPA DIHSTALMTI EGELDDISGS
GQTHVAHELC TGIEQAHRRS LTAEKCGHYG IFSGRRWRTI IYPQLRDFIR EHASQPKKPT
PQAGSTPNSP STPSRSASGS ETASAAPAKA AALKLSAKRT AAKTRAAKPP AAKRGAIKLA
APRTRKAA
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