| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1184 |
|---|
| Symbol | |
|---|
| ID | 4902114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1163849 |
|---|
| End bp | 1164721 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640134414 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001065463 |
|---|
| Protein GI | 126453295 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
|---|
| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.403048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATT CCAAGACCCT CGCGGATCGC ATCGAAGATC TGCTTCCCCA GACGCAATGC
ACGAAGTGCG GCTACGACGG CTGCCGTCCT TACGCGGAGG CGATCGCGGC CGGCACCGCC
GGCTATGATC AGTGCCCGCC GGGCGGCGCC GAAGGCGTCG CGCGGCTCGC GAAGCTGCTC
GGCAAGCCGG TGATCCCGCT CAATCAGGCG CACGGCGTCG AGCGTGCGCG CCCCGTCGCG
TTCATCGACG AGCAGCTTTG CATCGGCTGC ACGCTATGCA TGCAGGCGTG CCCCGTCGAC
GCGATCGTCG GGGCACCGAA GCAAATGCAT ACGATCGTCG CCGAGCTCTG CACCGGCTGC
GACCTGTGCG TGCCGCCATG CCCGGTCGAC TGCATCGCGA TGATACCCGT GACGGGCGAG
CGCACCGGCT GGGACGCGTG GTCGCAGCAG CAGGCCGATG CCGCGCGCGC GCGGCACGAT
GCGCGCGCGG CGCGCCTGAA GCGCGAGCGC GAAGCGGCCG AGGCGCGCGC GGCGGCGCGC
CGCGCGGCAA GCGCCGCGGC CGCTCACGCG CCCGCGTCGT CGGCGGCCGC CCCCGCCGCG
CCGGCCGCCG ACGACGCGGA TGCGAAGAAG CGTGCGATCA TCGCGGCGGC GCTCGAACGC
GCGCGCAAGA AGAAGGAGGC GCTCGCCGCA CAAGGCGCAG GGCCGAAGAA CACCGAAGGC
GTGAGCGCCG CGGTGCAGGC GCAGATCGAC GCGGCCGAAG CGCGGCGGCG CCGTCTCGCC
GAGCAACGCG ACGCAGCCGG CGAACCCGGC CGCCCGGACG ACGCGAACGC CGCGGGCGAC
GACGCGTCGC CGCCCTCGAA AACGAAACAG TGA
|
|---|
| Protein sequence | MTDSKTLADR IEDLLPQTQC TKCGYDGCRP YAEAIAAGTA GYDQCPPGGA EGVARLAKLL
GKPVIPLNQA HGVERARPVA FIDEQLCIGC TLCMQACPVD AIVGAPKQMH TIVAELCTGC
DLCVPPCPVD CIAMIPVTGE RTGWDAWSQQ QADAARARHD ARAARLKRER EAAEARAAAR
RAASAAAAHA PASSAAAPAA PAADDADAKK RAIIAAALER ARKKKEALAA QGAGPKNTEG
VSAAVQAQID AAEARRRRLA EQRDAAGEPG RPDDANAAGD DASPPSKTKQ
|
|---|
| |