| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1132 |
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| Symbol | |
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| ID | 4900814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1112987 |
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| End bp | 1114693 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640134362 |
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| Product | hemolysin activation/secretion protein |
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| Protein accession | YP_001065412 |
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| Protein GI | 126451960 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.330921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAGGAT ATACACAGCA GGTACCGTCC CCTGCCGACC AAGCCGCAGC CGCGCGCGCC
AATGCGGAAC AGGACCGGCA GGCGCAGCAG CAACGAGATG CGCAGCAGCG CGATGCGGCC
GTGCGTGCCC CGTCCGTGCG CTCCGAGGTG CCGAAGGTCG AAGCGTACCC GGCGCTCCCG
GCGGAAACAC CATGCTTTCG TATCGATCGC TTTACGCTCG ACGTACCCAA CTCCTTGCCC
GACACGACGA AGGCACAGGG GGCGTCCGCC CTCCCGATGG ATCGCTTCGC GTTCGCCCGT
GCCTGGCTGA ACCACTACGC CGGCCAATGC GTCGGCAAGC AAGGCGTTGA CGTGCTGATC
AAAGAGCTCT CTCAAGCGAT TCTGGCGCGC GGCTACGTCA CCACACGCGT GCTCGTCCCC
GAGCAAGACC TGTCGGCCGG CACGCTGAAA TTCTCGCTGA TTCCCGGCGT GATTCGCCAT
GTGCGCTTCG CCGACGAAAA ACTGCGCGGC ACATGGAAGA CCGCGTTCCC GACCGGTGAC
GGCGAAGTGC TGAACCTGCG CGACCTCGAA CAAGGCCTTG AGCAGATGAA GCGCGTGACG
AGCCAGGATG TCTCGATGCA GATTGTTCCC GGCGAGCTGC CCGGTGAAAG CGATGTCGTG
CTCGATGTGA AGCGCAGCAA GCCGTGGACC GTCGTCGCAT CGATCGACAA TTCTGGCACA
CGCGCTACGG GCAAGCTGCA AGGCAACCTG TCGGTCGGCG TCGACAATCC GCTTGGCCTG
AACGACATGC TCAACGTTGG CGTCAGCCAA GACCTCGAAT TCGGCGACAA GCGCCTCGGC
TCGCACGGCT GGAACGGCTT CTATTCGATT CCGTGGGGTT ACTGGACTGC CACGCTGTCC
GCATACACGA ACACCTACTA TCAGCAGATT GCGGGTGTGA ACCAGACATT CATCGCGAGC
GGCAACTCGA AGACAGTCGA TCTCAAACTG GCTCGGGTGC TGGCGCGCAG CCAGAACGAC
GTGCTCGGAG GGTATTTCCG GCTGTCCCGC CGTTTCGGCG AGAGCTTTAT CGAGGACACT
GAGATTTCGC AACAGCGTCG TAACAACACG ATCATCGAAC TCGGTTTGAC CGACCGGCAC
TACTTCGACG GCGCGCAATT CGACGGCTCG CTCGCGTATC GCCAAGGTGT CGGCGGATTC
GGCGCGCAGG ACGACACACT GGCGGCGAGC GGCTCGACCT ATCGCTTCAA GATGGCCGTG
CTCGACGCGA ACCTCTCGGT GCCGTTTGCA ATCGGCGAAC AACCGTTCCG CTACGTTGGA
ACGTTCCACG GCCAGTACAC CGGAAACACG CTCTACTACC TCGATGACCT GACGATCGGC
AGCCGATATA CCGTGCGCGG CTTCGACGGA GAAACGATGC TGGCGGCGTC GCGCGGGTTC
TACTGGCGTA ACGAGTTGCA AATGCAGATT GGCCAGACGA GGCAAGCGGT GTATGCAGGG
CTGGATTACG GGCGCGTGTG GGGGCCTCAG CCGATTGCGC TCGTCGGTAC GCAGTTGGCC
GGCGCCGTCA TCGGTATGAA GGGAAGCATC GGGACGCGCT TCGGTGCCTA CGCGTATGAC
CTGTTTGCAG GCACGCCTGT CTATAAGCCG TCCGGCTTTC CAACTGCGCG TGTCACCGTC
GGATTCCAGC TGACTTCGCA GTTTTGA
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| Protein sequence | MIGYTQQVPS PADQAAAARA NAEQDRQAQQ QRDAQQRDAA VRAPSVRSEV PKVEAYPALP
AETPCFRIDR FTLDVPNSLP DTTKAQGASA LPMDRFAFAR AWLNHYAGQC VGKQGVDVLI
KELSQAILAR GYVTTRVLVP EQDLSAGTLK FSLIPGVIRH VRFADEKLRG TWKTAFPTGD
GEVLNLRDLE QGLEQMKRVT SQDVSMQIVP GELPGESDVV LDVKRSKPWT VVASIDNSGT
RATGKLQGNL SVGVDNPLGL NDMLNVGVSQ DLEFGDKRLG SHGWNGFYSI PWGYWTATLS
AYTNTYYQQI AGVNQTFIAS GNSKTVDLKL ARVLARSQND VLGGYFRLSR RFGESFIEDT
EISQQRRNNT IIELGLTDRH YFDGAQFDGS LAYRQGVGGF GAQDDTLAAS GSTYRFKMAV
LDANLSVPFA IGEQPFRYVG TFHGQYTGNT LYYLDDLTIG SRYTVRGFDG ETMLAASRGF
YWRNELQMQI GQTRQAVYAG LDYGRVWGPQ PIALVGTQLA GAVIGMKGSI GTRFGAYAYD
LFAGTPVYKP SGFPTARVTV GFQLTSQF
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