Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1095 |
Symbol | hisJ |
ID | 4902186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1077575 |
End bp | 1078351 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640134325 |
Product | histidine ABC transporter, periplasmic histidine-binding protein |
Protein accession | YP_001065375 |
Protein GI | 126452224 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC TCGCCCTGTG CGCGGCCCTC GCCCTTGCGG CGGGCGGCGC CTTCGCGAAG GAATGGAAGA CCGTGCGGAT CGGCGTCGAC GCCAGCTATC CGCCGTTCGA ATCGACCGCG CCGAGCGGCG AGATCGTCGG ATTCGACGTC GATCTCGCGA AGGAAGTCTG CAAGCGGATC AACGCGAAGT GCACATGGAC GCCGCAGGAT CTCGACGGCA TCATCCCCGC GCTGAAGGCG AAGAAGTTCG ACGTGATCGT GTCGTCGCTG ACCGTCACCG ACAAGCGCCG CGAGCAGATC GATTTCTCCG ACAAGCTGTA CGACGCGCCC GCGCGAATGA TCGCGAAGGC GGGCTCGCCG CTCGCGCCGA GCGTCGAGTC GCTCAAGGGC AAGCGCGTCG GCGTCGAGCA GGGCTCGACC CAGGAAACCT TCGCGAAGGC GCACTGGGAG CCGAAGGGCG TGACGATCGT GTCGTACCAG AACCAGGATC AGGTGTATGC CGATCTCGGC TCGGGGCGCC TCGATGCGAC GCTGCAAGAC GAGTTGCAGG CCGACTACGG CTTCCTGCGC ACGCCGCGCG GCAAGGGCTT CGCCTGGGCA GGTCCGGCCG TGAAGGATCC GCGCACGCTC GGCGACGGCA CCGCGATGGG CCTGCGCAAG GAAGACGCGG ACCTGAAGGA CGCGATCAAC CGCGCGCTCG CTTCGATGCA CAAGGACGGC ACGTACGACA GGCTCTCGCG CAAGTACTTC CCGTACAGCG TGTATTCGGC GAAGTAA
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Protein sequence | MKKLALCAAL ALAAGGAFAK EWKTVRIGVD ASYPPFESTA PSGEIVGFDV DLAKEVCKRI NAKCTWTPQD LDGIIPALKA KKFDVIVSSL TVTDKRREQI DFSDKLYDAP ARMIAKAGSP LAPSVESLKG KRVGVEQGST QETFAKAHWE PKGVTIVSYQ NQDQVYADLG SGRLDATLQD ELQADYGFLR TPRGKGFAWA GPAVKDPRTL GDGTAMGLRK EDADLKDAIN RALASMHKDG TYDRLSRKYF PYSVYSAK
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