Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1091 |
Symbol | |
ID | 4901350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1073180 |
End bp | 1074271 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640134321 |
Product | putative outer membrane porin |
Protein accession | YP_001065371 |
Protein GI | 126453231 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.432467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGA AAGTTATGCT CGCGGCGGTA CTGGCGACTG CCGGAGTGGC GGCTCACGCT CAAAGCAGCG TGACGCTGTA CGGCCGTCTG GACGCCGGCA TCGAATACAT GAACGGCCTG CCGAGCGCGA ACGGCGGCAG CACGAGCCGC TGGCGCGCGG AAAGCGGCAA CTGGGGCACG AGCCTCTGGG GCTTGAAGGG CTCCGAGGAC ATCGGCGGCG GCAACAAGAT CGTGTTCCAG TTGGAAGGCA GCTTCGACAC GATGAACGGC AACGGCCCGG GCGCCGGCAG CATCTGGAAC CGCTGGGCAA CGATCGGCAT CTCCAACGAC ACGTACGGTA CCCTGCTGCT CGGCCGCGAG CTCGCGATCG CGAACGGCGT GTGGGACTTC GATCCGTTCG GCCAGTCGTC GTGGTCGACG GCTTCGCTCG TGCGCGGGCG CAACTGGAAC AAGACCAGCA ACAACATTTC GTATCAATCG CCGAAGTTCT ACGGCTTCGA CGTCTACGGC CAATACGCGC TGTCGAACGC GACGAACTGG AACGGCAACG GCTCGACGAG CCAGGGCCGC AGCGCGGGCC TGCAGCTCAC CTACACGACC TCGCTGTTCC AGATCCGCGG CCTCTATGAC GAAGCGCGCG ATCCGGCGAA CGGCAAGCTC GACGACGTGT TCAACTACTC GCGCGAATAT TTCGCTGGCG TGAACGTGTT CCTCGGCCAG TTCAAGCTGC AGGCGGCATA CCAGGCGTCG CACGCGGACG GCGGCCCGGT CGTGAACAAC GGCATCACGA CGACCCAGCA GGTCTGGGGC GGCGTGACGT GGCAGGCAAC GCCCGCCGCC GCGCTGATCG CGGCCGTCTA TCACGTGAAC GCGAATCACG GCGGCGGCAA CGCGAACATC TTCACGGTCG GCGGCTCGTA CAACCTGTCG AAGCGCACGC TGCTCGACGT GCAGGTCGCG ACGGTGCGCA ACAGCAAGAC CGCGAACTTT GGCCTGAACG CGAACCCGGC CGGCACCGAC ATCTCGACCG GCAATCCGAA GTTCGGCGGC AGCCAGACGG GCGTGTACGC CGGCATCCAG CACCTGTTCT GA
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Protein sequence | MMKKVMLAAV LATAGVAAHA QSSVTLYGRL DAGIEYMNGL PSANGGSTSR WRAESGNWGT SLWGLKGSED IGGGNKIVFQ LEGSFDTMNG NGPGAGSIWN RWATIGISND TYGTLLLGRE LAIANGVWDF DPFGQSSWST ASLVRGRNWN KTSNNISYQS PKFYGFDVYG QYALSNATNW NGNGSTSQGR SAGLQLTYTT SLFQIRGLYD EARDPANGKL DDVFNYSREY FAGVNVFLGQ FKLQAAYQAS HADGGPVVNN GITTTQQVWG GVTWQATPAA ALIAAVYHVN ANHGGGNANI FTVGGSYNLS KRTLLDVQVA TVRNSKTANF GLNANPAGTD ISTGNPKFGG SQTGVYAGIQ HLF
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