Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1071 |
Symbol | |
ID | 4900205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1051151 |
End bp | 1051669 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640134301 |
Product | pilus biogenesis protein |
Protein accession | YP_001065351 |
Protein GI | 126452988 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTTC TTAAACACCC TCTGTTGTCG GCGCTCGCCG CCGCCGTTCT CGTCGCAACG CCGTCGTTTC GTCCCGCCAC GGCCGCGACC GCTACGGCCA CCTTCACCGT CTCGCTGACG ATCCAGGCCA ACTGCACGAT TTCCGCCAAT GCGCTGTCGT TCGGCACGAA CGGCGTGCTC GCGACGGCCG TCAATCAGCA GACGACGCTG TCCGTCACCT GCTCGAACAC GACCTCCTAC AACGTCGGGC TCGACGCGGG CAACGTGTCC GGCTCGACCG TCTCGAGCCG CCTGCTCGCC GGCACGACGA CGGGCAACAC CAGCACGACG GTCAGCTTCC AGCTCTATCA GGATTCGGGC CATACCACGA TCTGGGGCAA TACAGTCGGC ACCAACACGG TGAGCGGTAC CGGCAACGGC ACCGCGCAGA CGCTCAGCGT ATACGGCCAG GTGCCCGCGC AAACGACGCC GAAGCCCGAT ACCTACGAGT CGACCGTCAC CGCGACCATC ACCTTCTGA
|
Protein sequence | MYFLKHPLLS ALAAAVLVAT PSFRPATAAT ATATFTVSLT IQANCTISAN ALSFGTNGVL ATAVNQQTTL SVTCSNTTSY NVGLDAGNVS GSTVSSRLLA GTTTGNTSTT VSFQLYQDSG HTTIWGNTVG TNTVSGTGNG TAQTLSVYGQ VPAQTTPKPD TYESTVTATI TF
|
| |