Gene BURPS1106A_1063 details

Gene Information

• Locus tag: BURPS1106A_1063
• Symbol: dcd
• ID: 4901435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 1041240
• End bp: 1041809
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640134293
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_001065343
• Protein GI: 126451751
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA AGTCCGACAA GTGGATTCGG CGCATGGCCG AAGAGCACAA GATGATCGAG 
CCGTTCGTGC CCGATCAGGT TCGCGCCGCC GAGGACGGCC GCAAGATCGT CAGCTACGGC 
ACGTCGAGCT ACGGCTACGA CATCCGCTGC GCGGACGAAT TCAAGATCTT CACGAACATC 
AATTCGACGA TCGTCGATCC GAAGAACTTC GACGAAGGCT CGTTCGTCGA TTTCAAGGGC 
GACGTGTGCA TCATCCCGCC GAACTCGTTC GCGCTCGCGC GCACCGTCGA ATATTTCCGC 
ATTCCGCGCA CCGTGCTCAC CGTGTGCCTC GGCAAGTCGA CGTACGCGCG CTGCGGCATC 
ATCGTCAACG TGACGCCGTT CGAGCCCGAG TGGGAAGGCT ACGTGACGCT CGAATTCTCG 
AACACGACGC CGCTGCCCGC GAAGATCTAC GCGAACGAGG GCGTCGCGCA GGTGCTCTTC 
TTCGAGAGCG ACGAAGTCTG CGACGTGTCC TATGCCGACC GCGGCGGCAA GTATCAGGGA 
CAGCGCGGTG TCACGCTGCC GAAAACCTGA 

 

Protein sequence

MSIKSDKWIR RMAEEHKMIE PFVPDQVRAA EDGRKIVSYG TSSYGYDIRC ADEFKIFTNI 
NSTIVDPKNF DEGSFVDFKG DVCIIPPNSF ALARTVEYFR IPRTVLTVCL GKSTYARCGI 
IVNVTPFEPE WEGYVTLEFS NTTPLPAKIY ANEGVAQVLF FESDEVCDVS YADRGGKYQG 
QRGVTLPKT