Gene BURPS1106A_1039 details

Gene Information

• Locus tag: BURPS1106A_1039
• Symbol: cobC
• ID: 4899359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 1015425
• End bp: 1016024
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 640134269
• Product: alpha-ribazole phosphatase
• Protein accession: YP_001065319
• Protein GI: 126451705
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0406] Fructose-2,6-bisphosphatase
• TIGRFAM ID: [TIGR03162] alpha-ribazole phosphatase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.634348
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTCG TCCTGATCCG CCATCCGGCG GTCGCGCTCG GCACGGGCGT CTGCTACGGC 
GCGAGCGACG TGCCGCTCGC GGCCGGCGCG GCGGCGGGCG CGGCCGGCAT TCGGCGGCGG 
CTGCGCTCGC TCGGCGTCGC GCGCGCGTCG CGCGTGTGGT CGAGCCCGCT CGCGCGCTGC 
GCGGACGTCG CGCGCGCGCT GGCGGGCGGC GTGCGCGCGC CGCTCGAGAT CGATCCGCGC 
CTGCGCGAAA TCGATTTCGG CGCGTGGGAG ATGCAAAGCT GGGACGCGAT CGGCCGCGAC 
GCGCTCGATC GATGGAGTGC CGATCTGATG CACGCGCGCG AGCACGGCGG GGAGAGCGCC 
GCGCAGTTCG TCGCGCGCGT GCGGCCTGCG TTCGCGACGC TCGCCGTCGC GGCGCGCACG 
AGCTGGGTGC TCACGCATGC GGGCGTGATC CGCGCGCTGG CGTCGCACGC GCTCGATGCG 
CCGCTCGACG CGATGCTCGC GCGGCCGATC GCGATGGGCG GCATCGTATG GTTGCGGTGC 
GACGAAGGTG GCGACAGCGA TTGCGCTCGC GGCTGGCGAA TCGCGCATTG GGACGAATGA 

 

Protein sequence

MDVVLIRHPA VALGTGVCYG ASDVPLAAGA AAGAAGIRRR LRSLGVARAS RVWSSPLARC 
ADVARALAGG VRAPLEIDPR LREIDFGAWE MQSWDAIGRD ALDRWSADLM HAREHGGESA 
AQFVARVRPA FATLAVAART SWVLTHAGVI RALASHALDA PLDAMLARPI AMGGIVWLRC 
DEGGDSDCAR GWRIAHWDE