| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1007 |
|---|
| Symbol | |
|---|
| ID | 4899784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 986100 |
|---|
| End bp | 986882 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640134237 |
|---|
| Product | class II aldolase/adducin domain protein |
|---|
| Protein accession | YP_001065288 |
|---|
| Protein GI | 126452376 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGACA CATTGAAGAT GGGCAAGGCC GAGCTCGTCG CGCTCGCGCA GCGGCGGCTC
GACAACGAGA TCAAGGACAG CGGGTGGAGC GCGCGCGAGA AGCTCGCGCT CACCTGCCGG
ATCCTGTTCG ACGACGGGCA CGACTCCGGC CTCGCCGGGC AGATCACGTG CCGCGCCGAC
GCGCCGCACA CGTACTACAC GCAGCGCCTC GGGCTCGGCT TCGACGAGAT CGCCGAATCG
AACCTGCTGC AGGTCGATCA GGACCTCGAG GTCATCGGCG GCCAGGGCAT TCCGAATCCC
GCGAACCGCT TTCACACGTG GATTTATCGC GCGCGCCCCG ACGTCAACTG CATCATCCAC
ACGCACCCGA CGCACGTCGC CGCGCTGTCG ATGCTCGAGA CGCCGCTCGT CGTGTCGCAC
ATGGACACCT GTCCGCTTCA CGGCGACTGC GCGTTCCTGA AGGATTGGCC GGGCGTGCCC
GTCGGCAACG AGGAAGGCGA GATCATCTCG AACGCGCTCG GCGACAAGCG CGCGATCCTG
CTGTCGCATC ACGGCCAGCT CGTCGTCGGC AAGACGATCG AAGAGGCGTG CATGCTCGCG
ATCCTGATCG AGCGCGCGGC GCGGCTGCAA CTGCTCGCGA TGGCGGCCGG CGCGATCGCG
CCGATTCCGC CCGCGCTCGC GGCCGACGCG CACGACTGGA TCTCGACGCC CAAGCGCGAC
GCGGTGACCT TCGCGTACTA CGCGCGCCGC GCGCTACGCC GCCACCCCGA CTGCCTCGAC
TGA
|
|---|
| Protein sequence | MVDTLKMGKA ELVALAQRRL DNEIKDSGWS AREKLALTCR ILFDDGHDSG LAGQITCRAD
APHTYYTQRL GLGFDEIAES NLLQVDQDLE VIGGQGIPNP ANRFHTWIYR ARPDVNCIIH
THPTHVAALS MLETPLVVSH MDTCPLHGDC AFLKDWPGVP VGNEEGEIIS NALGDKRAIL
LSHHGQLVVG KTIEEACMLA ILIERAARLQ LLAMAAGAIA PIPPALAADA HDWISTPKRD
AVTFAYYARR ALRRHPDCLD
|
|---|
| |