| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1006 |
|---|
| Symbol | |
|---|
| ID | 4901159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 985122 |
|---|
| End bp | 986018 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640134236 |
|---|
| Product | putative dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001065287 |
|---|
| Protein GI | 126454975 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACC TCTTGCAAGG CATCATCGCC TACCCCGTCA CGCCCTTCTC GCCGGACGGC
CGGCTCGACA CGGCCGCGCT CGGCGCGCTC ATCGAACGCC TGATCGCGAG CGGCGTGCAC
GGCATCGCGC CGCTCGGCAG CACCGGCGAA AGCGCCTATC TGTCCGACGC CGAATGGGAA
GCCGCCGCGT CGGCCTCGAT TCGCGCGGTC GAGCGCCGCG TGCCGACCGT CGTCGGCATT
TCCGATCTCA CCACCGCGAA CGCGGTGCGC CGCGCGAAAT TCGCCGAACA GGCGGGCGCG
GACGCGGTCA TGGTGCTGCC CGTGTCGTAC TGGCGGCTCG ACGACGAAGC GATCGTCGGC
CACTACCGCG CGATCGGCGA CGCGATCGGC ATTCCGATCA TGCTGTACAA CAACCCGGCG
ACGAGCGGCA TCGACATGTC GCCCGAGCTG ATCGCGCGCA TCTTCCGCAC GGTCGACAAC
GTGACGATGG TCAAGGAGAG CACGGGCGAC ATCAAGCGCA TGCACCGGCT CGCGCAACTG
GGCGACGGCG CGATCCCGTT CTACAACGGC AGCAATCCGA TGGCGCTCGC CGCGCTCGCG
GCCGGCGCGG CCGGCTGGTG CACCGCCGCG CCGAACCTGA ACGCGCGCCT GCCGCTCGCG
TTATACGACG CGATGCGCGC AAGCGATCTC GACACGGCGC GCGCCGTCTT TCATCGACAG
TTGCCGCTGT TGCAGTTCAT CGTCTCGGGC GGGCTGCCCG TCACGGTGAA GGCCGGGCTG
CGGCTCGCGG GCTTCGACGC GGGCGAGCCG CGCAAGCCGC TGCGCCCGCT CGACGAAGCG
CGCACGCGCG AGCTCGCCGC GATTCTCGAC GCGCTGCGCG ACACCGCGCA CGCGTGA
|
|---|
| Protein sequence | MSNLLQGIIA YPVTPFSPDG RLDTAALGAL IERLIASGVH GIAPLGSTGE SAYLSDAEWE
AAASASIRAV ERRVPTVVGI SDLTTANAVR RAKFAEQAGA DAVMVLPVSY WRLDDEAIVG
HYRAIGDAIG IPIMLYNNPA TSGIDMSPEL IARIFRTVDN VTMVKESTGD IKRMHRLAQL
GDGAIPFYNG SNPMALAALA AGAAGWCTAA PNLNARLPLA LYDAMRASDL DTARAVFHRQ
LPLLQFIVSG GLPVTVKAGL RLAGFDAGEP RKPLRPLDEA RTRELAAILD ALRDTAHA
|
|---|
| |