Gene BURPS1106A_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1000 
Symbol 
ID4902914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp979839 
End bp980561 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID640134230 
ProductRNA pseudouridine synthase family protein 
Protein accessionYP_001065281 
Protein GI126454957 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG AAAGCATTCT GTTCACCCAA GGCTTCGGTT CGCGCCGCCA GTGCCGCGCG 
CTCGTCGAAG CGGGACACGT CGCCGTCGGC GGCGCGACGT GCGCCGACGC GCACGCATCG
TTCGACACTA CGCAGCTCGT GTTCGAAGTC GACGGCGTCG CCTGGCCGTA CCGCGCGCGC
GCTTACGTCG CGCTCAACAA GCCGGCCGGC TACGAATGCT CGCGCGAGCC GCAGCATCAT
TCGAGCGTGT TCGCGCTGCT GCCGCCGCAG TTCGCCGAGC GCGGCGTCCA GTGCGTCGGC
CGCCTCGACC AGGACACGAC GGGCCTGCTG CTCCTGTCCG ACGACGGCCA GTTCGTCCAT
GCGTACACGT CGCCGAAACG CAAGGTGCCG AAGACCTATG TCGCGACGGT GCGCCACCCG
CTCGACGACG CGCAGCTCGA CGCGCTGCGC GCGGGCGTGC TGCTGCACGG CGAGCCGAAA
CCGGTCGCCG CGCTCGCCGC CGTTGCCCGA GGAGAACGAC TCCTCGAAAT GACGATCGCC
GAAGGAAAAT ACCACCAGGT GAAGCGCATG GTCGCCGCCG CGAGCAACCG CGTCGAGGCG
TTGCACCGCT CGCGCATCGG CGGCTTCGCG CTGCCCGAGG ATCTCGCCGA AGGCGCGTGG
CGCTGGCTCG ACGAACGCGA TCTCGCCGCC TTGCGCGACA CGGCAGAAAC CCTGTCAGGG
TAA
 
Protein sequence
MDLESILFTQ GFGSRRQCRA LVEAGHVAVG GATCADAHAS FDTTQLVFEV DGVAWPYRAR 
AYVALNKPAG YECSREPQHH SSVFALLPPQ FAERGVQCVG RLDQDTTGLL LLSDDGQFVH
AYTSPKRKVP KTYVATVRHP LDDAQLDALR AGVLLHGEPK PVAALAAVAR GERLLEMTIA
EGKYHQVKRM VAAASNRVEA LHRSRIGGFA LPEDLAEGAW RWLDERDLAA LRDTAETLSG