Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1000 |
Symbol | |
ID | 4902914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 979839 |
End bp | 980561 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640134230 |
Product | RNA pseudouridine synthase family protein |
Protein accession | YP_001065281 |
Protein GI | 126454957 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCTCG AAAGCATTCT GTTCACCCAA GGCTTCGGTT CGCGCCGCCA GTGCCGCGCG CTCGTCGAAG CGGGACACGT CGCCGTCGGC GGCGCGACGT GCGCCGACGC GCACGCATCG TTCGACACTA CGCAGCTCGT GTTCGAAGTC GACGGCGTCG CCTGGCCGTA CCGCGCGCGC GCTTACGTCG CGCTCAACAA GCCGGCCGGC TACGAATGCT CGCGCGAGCC GCAGCATCAT TCGAGCGTGT TCGCGCTGCT GCCGCCGCAG TTCGCCGAGC GCGGCGTCCA GTGCGTCGGC CGCCTCGACC AGGACACGAC GGGCCTGCTG CTCCTGTCCG ACGACGGCCA GTTCGTCCAT GCGTACACGT CGCCGAAACG CAAGGTGCCG AAGACCTATG TCGCGACGGT GCGCCACCCG CTCGACGACG CGCAGCTCGA CGCGCTGCGC GCGGGCGTGC TGCTGCACGG CGAGCCGAAA CCGGTCGCCG CGCTCGCCGC CGTTGCCCGA GGAGAACGAC TCCTCGAAAT GACGATCGCC GAAGGAAAAT ACCACCAGGT GAAGCGCATG GTCGCCGCCG CGAGCAACCG CGTCGAGGCG TTGCACCGCT CGCGCATCGG CGGCTTCGCG CTGCCCGAGG ATCTCGCCGA AGGCGCGTGG CGCTGGCTCG ACGAACGCGA TCTCGCCGCC TTGCGCGACA CGGCAGAAAC CCTGTCAGGG TAA
|
Protein sequence | MDLESILFTQ GFGSRRQCRA LVEAGHVAVG GATCADAHAS FDTTQLVFEV DGVAWPYRAR AYVALNKPAG YECSREPQHH SSVFALLPPQ FAERGVQCVG RLDQDTTGLL LLSDDGQFVH AYTSPKRKVP KTYVATVRHP LDDAQLDALR AGVLLHGEPK PVAALAAVAR GERLLEMTIA EGKYHQVKRM VAAASNRVEA LHRSRIGGFA LPEDLAEGAW RWLDERDLAA LRDTAETLSG
|
| |