Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0943 |
Symbol | |
ID | 4900262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 924363 |
End bp | 925631 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640134173 |
Product | cyclic diguanylate phosphodiesterase |
Protein accession | YP_001065224 |
Protein GI | 126453626 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGACA TCGATCCTCC CAGCTTCCAG TCGCCGCGCC CGATCGCGGG CGACGACGGC AACCGGCGCA CCGTGCTGTA CGGCGACTAC ACCGTGTTCA GCGTGTTCCA GCCGGTCTTC TCGGTGTCGC ATCGCCGTGC GATCGGCTAT CACGCGTCGC TGCGCGCGCA CGATTCGCAG GGCAACCAGG TGCCCTCGCA CGAGGTGTTC ACACAGGCCG CGCGCCGCGG CGATCTGCTC GAACTCGGCC GCCTCGCCGA ATCGCTGCAC CTGGGCAACT TCCACACGTT CGACAGTCAC GACGAATGGC TCTTCCTGAG CCTGCATCCC GCCGCGCTGA TGGACACCGT CTACGGCGAC GCGCTCCTCG CGAACCTGAA GGCACTCGGG CTGCCGCCGC AGCGCGTCGT GCTCGAAGTG CCCGAGCAGG CGGGCGGCGA GACGCCGCGC TTCGCGGCGA TCGTCGACGG CCTGCGCAAG GCGGGTTTCC TGATCGCGCT CGGCGGCTTC GGCGCGAAGC ACTCGAACAT CGATCGCGTC TGGCACCTGC ACCCGGACAT CGTCACGCTC GATCGCGGCA TCCTCGCGCA GGCAAGCGAG CATTCGCATC TCGAGCGCGT GCTGCCCGGC CTCGTGTCGC TGCTGCACGA GTCGGGGCAG CTCGTGCTGA TGGGCGGCAT CACGACCGAG CGCGAAGCGC TGATCGCGCT CGAATGCGAC GTCGATTTCG TACAAGGGCA ATACTTCGCC GGGCCGAGCG TCGAGCCGGT GCAGCCGCAG GCCGCGGCGG GCGTCATGGA TACGCTGTCG GCCGCGCTTC GGCTGCGCGT CGCCGAGCGC ACGCGCGCGC AGCAAGCGCG CCTCGCGCCG TACGTCGCCG CGCTGCTGCA GGCGAGCGCG CTGCTGCGCG AAGGCCGTGA CCTCACCGAA GCGTCGAAGG AGCTGCTCGA GCTGCCCGAG GCGGCGCGCT GCTTCCTGCT CGACGCGTCG GGCCGTCAGA TCGGCGACAA CGTGCTGCCG CGCGTGCATG CATCGCAGCG CGCGAAGCGC TTCAGCCCGC TGCTGCACTC GGAAGGCGCG AGCTGGGAAC GCCGGCCGTA CTTCATCGAG GCGATGCGCG TGCCGGGGCG CGCGCATTTC ACGCCGCCCT ATCTGTCGAT CAATGAAGCG CACCTGTGCG TGACGGCGTC GATCGCGACG CCCGCGGTGC AAGGCATGCA GGTGCTCTGC GTCGACATCA ACTGGGAAGC CGCCGCGCAC CGCGACTGA
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Protein sequence | MIDIDPPSFQ SPRPIAGDDG NRRTVLYGDY TVFSVFQPVF SVSHRRAIGY HASLRAHDSQ GNQVPSHEVF TQAARRGDLL ELGRLAESLH LGNFHTFDSH DEWLFLSLHP AALMDTVYGD ALLANLKALG LPPQRVVLEV PEQAGGETPR FAAIVDGLRK AGFLIALGGF GAKHSNIDRV WHLHPDIVTL DRGILAQASE HSHLERVLPG LVSLLHESGQ LVLMGGITTE REALIALECD VDFVQGQYFA GPSVEPVQPQ AAAGVMDTLS AALRLRVAER TRAQQARLAP YVAALLQASA LLREGRDLTE ASKELLELPE AARCFLLDAS GRQIGDNVLP RVHASQRAKR FSPLLHSEGA SWERRPYFIE AMRVPGRAHF TPPYLSINEA HLCVTASIAT PAVQGMQVLC VDINWEAAAH RD
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