| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0914 |
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| Symbol | xerD |
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| ID | 4899905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 898656 |
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| End bp | 899657 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640134144 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001065195 |
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| Protein GI | 126455125 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.1246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG CAGTGCATGC TTGCGCGGCC GACACGGCGG GCGGCGACGC CGGCCGCGCA
CCCGCGCAGC CGGCCGACCG TCCCGTGGAC GCGCTTGCCG CGTCGCCGGC GTGGCTCGAC
AGCCGCGCGT CGATCGATCT GTTCTGCGAC GCGATGTGGC TCGAGCACGG GCTGTCGCGC
AACACGCTCG ACGCGTACCG GCGTGATCTG CAACTGTTCG CGCAATGGCT CGCCGCGCGG
CATGCGGCGA GCGTCGATCA TGCGAGCGAG CCGACGCTGA CCGAATACAT CGCCGCGCGC
AGCGACGGCA AGGCGACGTC GTCGAATCGC CGGCTATCGG TGTTTCGCCG CTACTACGGC
TGGGCGGTGC GCGAGCACCG CGCGGCCGTC GATCCGACGC TCAGGATCGC GTCGGCGAAG
CAGGCGCCGA GGTTTCCGTC GACGCTGTCC GAGGCGCAGG TCGAGGCGCT TCTCGCCGCG
CCCGACGTCG ATACGCCGCT CGGCCTGCGC GACCGCACGA TGCTCGAACT GATGTATGCG
AGCGGGTTGC GCGTGAGCGA GCTCGTCACG CTGAAGACGG TCGAGGTCGG ATTGAACGAA
GGCGTGGTGC GCGTGACGGG CAAGGGTTCG AAAGAGCGGC TCGTGCCGTT CGGCGAAGTC
GCGCACGGCT GGATCGAGCG CTATCTGCGC GATGCACGGC CCGCGCTACT CGGTGCGCGC
GCGGCGGATG CGCTGTTCGT CACCGCACGC GGCGACGGCA TGACGCGCCA GCAATTCTGG
AACATCATCA AGCGCCATGC GCAGCAGGCG GATGTTCGCG TGCATCTGTC GCCGCATACG
CTGCGGCACG CGTTCGCGAC GCATCTGCTC AATCACGGCG CGGACCTGCG GGTCGTGCAA
CTGCTGCTCG GCCATAGCGA TATCTCGACG ACGCAGATCT ACACGCACGT CGCGCGCGAG
CGGCTGAAGA CGCTGCATGC GGCGCATCAT CCGCGCGGAT GA
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| Protein sequence | MARAVHACAA DTAGGDAGRA PAQPADRPVD ALAASPAWLD SRASIDLFCD AMWLEHGLSR
NTLDAYRRDL QLFAQWLAAR HAASVDHASE PTLTEYIAAR SDGKATSSNR RLSVFRRYYG
WAVREHRAAV DPTLRIASAK QAPRFPSTLS EAQVEALLAA PDVDTPLGLR DRTMLELMYA
SGLRVSELVT LKTVEVGLNE GVVRVTGKGS KERLVPFGEV AHGWIERYLR DARPALLGAR
AADALFVTAR GDGMTRQQFW NIIKRHAQQA DVRVHLSPHT LRHAFATHLL NHGADLRVVQ
LLLGHSDIST TQIYTHVARE RLKTLHAAHH PRG
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