| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0885 |
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| Symbol | |
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| ID | 4900546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 868206 |
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| End bp | 869417 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640134115 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_001065166 |
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| Protein GI | 126453044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.106194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT GCACGACGCG GCCCGCCGGC TTCGCGCGGC CGTCGCGCGA AGCCGCGCGC
CTGCCGCTCG CGGGATTGCT CGCGCTCGCG ACGGCCGGCT TCATCACGAT CGTGACCGAG
GCGCTGCCCG CCGGGCTGCT GCCGCTGATG GGGCGCGACC TGCGCGTGTC CGATGCGCTC
GTCGGCCAGC TCGTCACAGT CTATGCGGCG GGCTCGATCG TCGCGGCGAT GCCGCTCGTC
GCGGCGACGC GCGGCATGCG CAGGCGGCCG CTGCTGCTCG CCGCGCTCGC GGGCTTCGTC
GTCGCGAACA CGGCGACGGC CGCGTCGCCG TACTACGCGC CCGTGCTCGT CGCGCGCTGC
GTCGCGGGCG TCTCGGCGGG GCTCCTGTGG GCGCTGCTCG CGGGCTACGC GAGCCGGATG
GTCGACGCGC GGCAGCGCGG CCGCGCGATC GCGATCGCGA TGCTCGGCGC GCCGGTGGCG
ATGTCGGTCG GCATTCCGCT CGGCACGGCG CTCGGCGCCG CGCTCGGCTG GCGCGCGACG
TTCGCCGGCG TGACGGCGCT CACGCTCGCG CTGATCGCGT GGGTGCGCGC GAGCCTGCCC
GATGCGCCGG GGCGGCCCTC GGGCGAGCGG CTGCCGGTCG CCCGCGTGCT GCGGATGCCG
GGCGTGCTGC CCGTGCTGGC GGTGATGTTC GCGTACGTGC TCGCGCACAA CATCCTCTAC
ACGTACATCG CGCCGTTTCT CGCGAGCGCC GGGATGGGCA CGCGCATCGA CGCGACGCTG
TTCGCGTTCG GCGCGGCGTC GTTCGCGGGC ATCGGTCTCA CGGGCGTGTG GATCGGCAAC
GGGCTGCGGC GGCTCGCGCT CGCGAGCATC GCGCTTTTCG CGCTCGCGTC CGTGCTGCTC
GGCGTGGCGA GCGGATCGCC CGCGGTCGTC TATGCGAGCG TCGCCGTGTG GGGGCTCACG
TTCGGCGGCG CGGCGACGGT CTTCCAGACC GCGTCGGCGA ACGCGGCGGG CGAGGCGGCG
GACGTCGCGC AATCGATGAT CGTCACGGTG TGGAATCTCG CGATCGCGGC CGGCGGCGTC
GCGGGCGGCG TGCTGCTCGA GCGGTTCGGC GCGGGCGCGA TGCCGTGGGC GCTCGTCGCG
CTGCTCGTGC CCGCGTGGCT CGGCGCGTGG CGCGCGCGGC GCCACGGCTT CCCGGCGGCC
CGCGCGCCGT GA
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| Protein sequence | MSDCTTRPAG FARPSREAAR LPLAGLLALA TAGFITIVTE ALPAGLLPLM GRDLRVSDAL
VGQLVTVYAA GSIVAAMPLV AATRGMRRRP LLLAALAGFV VANTATAASP YYAPVLVARC
VAGVSAGLLW ALLAGYASRM VDARQRGRAI AIAMLGAPVA MSVGIPLGTA LGAALGWRAT
FAGVTALTLA LIAWVRASLP DAPGRPSGER LPVARVLRMP GVLPVLAVMF AYVLAHNILY
TYIAPFLASA GMGTRIDATL FAFGAASFAG IGLTGVWIGN GLRRLALASI ALFALASVLL
GVASGSPAVV YASVAVWGLT FGGAATVFQT ASANAAGEAA DVAQSMIVTV WNLAIAAGGV
AGGVLLERFG AGAMPWALVA LLVPAWLGAW RARRHGFPAA RAP
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