| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0860 |
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| Symbol | bpeB |
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| ID | 4901439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 839833 |
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| End bp | 843033 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640134090 |
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| Product | inner membrane multidrug efflux protein BpeB |
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| Protein accession | YP_001065141 |
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| Protein GI | 126453664 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.744474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGT TTTTTATCGA TCGCCCGATC TTCGCGTGGG TGATCGCCAT CATCCTGATG
CTGGCCGGCG TCGCGGCGAT CTTCACGCTG CCGATCGCCC AGTATCCGAC GATCGCGCCG
CCGTCGATCC AGATCACCGC GAACTACCCG GGCGCTTCGG CGAAGACCGT CGAAGACACC
GTCACGCAGG TGATCGAGCA GCAGATGAGC GGCCTCGACA ACTTCCTGTA CATGTCGTCG
ACGAGTGACG ACTCGGGCAA CGCGACGATC ACGATCACAT TCGCGCCGGG CACGAACCCG
GACATCGCGC AGGTTCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGAT CCTGCCGCAG
GTGGTGCAGC AGCTCGGCCT GTCGGTGACG AAGTCGAGCA GCAGCTTCCT GCTCGTGCTC
GCCTTCAACT CCGAAGACGG CAGCATGAAC AAGTACGACC TGGCGAACTA CGTCGCGTCG
CACGTGAAGG ACCCGATCAG CCGGATCAAC GGCGTCGGCA CTGTCACGCT GTTCGGCTCG
CAGTACGCGA TGCGGATCTG GCTCGACCCG ACCAAGCTCA CGAACTACGG GCTCACGCCG
GTCGACGTGA CGAGCGCGAT CTCCGCGCAG AACGTGCAGA TCGCGGGCGG CCAGCTGGGC
GGCACGCCGG CCGTGCCGGG CACCGTGCTG CAGGCGACGA TCACCGAGGC GACGCTGCTG
CAGACGCCCG AGCAGTTCGG CAACATCCTG CTGAAGGTGA ATCAGGACGG CTCGCAGGTG
CGGCTGAAGG ACGTCGCGCA GATCGGCCTC GGCGGCGAGA CGTACAACTT CGACACGAAG
TACAACGGCC AGCCGACCGC CGCGCTCGGC ATCCAGCTCG CGACCAACGC GAACGCGCTC
GCGACCGCGA AGGCGGTGCG CGCGAAGATC GACGAGATGT CGGCGTACTT CCCGCACGGC
CTCGTCGTCA AGTACCCGTA CGACACGACG CCGTTCGTGC GCCTGTCGAT CGAGGAAGTG
GTGAAGACGC TGCTCGAGGG TATCGTCCTC GTGTTCCTCG TGATGTATCT GTTCCTGCAG
AACCTGCGGG CGACGATCAT CCCGACGATC GCGGTGCCCG TCGTGCTGCT CGGCACGTTC
GCGATCATGT CGATGGTGGG CTTCTCGATC AACGTGCTGT CGATGTTCGG CCTCGTGCTC
GCGATCGGCC TGCTCGTCGA CGATGCGATC GTCGTCGTCG AGAACGTCGA GCGGGTGATG
GCGGAAGAGG GCTTGCCGCC GAAGGAGGCG ACGCGCAAGG CGATGGGCCA GATCACGGGC
GCGCTCGTGG GCGTGGCGCT CGTGCTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCGGGC
GGCTCGGTCG GCGCGATCTA TCGGCAGTTC TCGCTGACGA TCGTCTCGGC GATGGTGCTT
TCCGTGCTCG TCGCGTTGAT TCTGACGCCG GCGCTGTGCG CGACGATCCT CAAGCCGATC
CCGCAAGGGC ATCACGAGGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG CACCTTCAAC
TCGAGCCGCG ACAAGTATCA CGTCGGCGTC CACCACGTGA TCAAGCGCTC GGGCCGCTGG
CTCATCATCT ATCTCGCGGT GATCGTCGCG GTCGGCCTGC TGTTCGTGCG CCTGCCGAAA
TCGTTCCTGC CCGACGAGGA CCAGGGCCTG ATGTTCGTGA TCGTTCAGAC GCCGTCGGGC
TCGACGCAGG AGACGACCGC GCGCACGCTC GCGAACATTT CCGACTACCT GCTCACGCAG
GAGAAGGACA TCGTCGAATC CGCGTTCACG GTCAACGGCT TCAGCTTCGC GGGCCGCGGC
CAGAACTCGG GCCTCGTGTT CGTCAAGCTG AAGGACTACT CGCAGCGGCA GAGCTCGGAC
CAGAAGGTGC AGGCGCTGAT CGGCCGGATG TTCGGACGCT ACGCGGGCTA CAAGGACGCG
CTCGTGATTC CGTTCAACCC GCCGTCGATT CCCGAACTCG GCACGGCGGC CGGCTTCGAC
TTCGAGCTGA CCGACAACGC GGGCCTCGGC CACGATGCGC TGATGGCCGC GCGCAACCAG
TTGCTCGGGA TGGCCGCGAA GGATCCGACG CTGCGGGGCG TGCGTCCGAA CGGGCTGAAC
GACACGCCGC AGTACAAGGT CGACATCGAT CGCGAGAAGG CGAACGCGCT CGGCGTGACC
GCGGATGCGA TCGACCAGAC GTTCTCGATC GCGTGGGCGT CGAAGTACGT GAACAACTTC
CTCGACACCG ACGGCCGGAT CAAGAAGGTG TACGTGCAGT CCGACGCGCC GTTCCGGATG
ACGCCGGAGG ACATGAACAT CTGGTACGTG CGCAACGGCT CGGGCGGGAT GGTGCCGTTC
TCCGCGTTCG CGACCGGCCA CTGGACCTAC GGCTCGCCGA AGCTCGAGCG CTACAACGGC
ATCTCGGCGA TGGAAATCCA GGGCCAGGCC GCGCCGGGCA AGTCGACCGG CCAGGCGATG
ACGGCGATGG AGACGCTCGC GAAAAAGCTG CCGACGGGCA TCGGCTATTC GTGGACGGGG
CTGTCGTTCC AGGAAATCCA GTCGGGCTCG CAGGCGCCGA TCCTGTACGC GATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCCGCGCTG TATGAAAGCT GGTCGATCCC GTTCTCGGTG
ATCATGGTCG TGCCGCTCGG CGTGATCGGC GCGCTGCTCG CCGCGACGCT GCGCGGGCTC
GAGAACGACG TGTTCTTCCA GGTCGGCCTG CTGACGACGG TGGGGCTGTC GGCGAAGAAC
GCGATCCTGA TCGTCGAGTT CGCGCGCGAG CTGCAGCAAA CGGAGAAGAT GGGGCCGATC
GAGGCGGCGC TCGAGGCGGC GCGGCTGCGG CTGCGTCCGA TTCTGATGAC GTCGCTCGCG
TTCATTCTCG GCGTGATGCC GCTCGCGATC AGCAACGGCG CAGGCTCGGC GAGCCAGCAC
GCGATCGGCA CCGGCGTGAT CGGCGGGATG ATCACCGCGA CGTTCCTCGC GATCTTCATG
ATCCCGATGT TCTTCGTGAA GGTGCGGGCA GTGTTCAGCG GCGAGAAGGA AGACGCCGAC
GAAGCGCTGC GCCTCGCGCA CGAGCACATG CACCGTGACG ACAAGCCGGA GCACGGCGAC
GACGCTGGCA AGAAGGACTA A
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| Protein sequence | MAKFFIDRPI FAWVIAIILM LAGVAAIFTL PIAQYPTIAP PSIQITANYP GASAKTVEDT
VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TITFAPGTNP DIAQVQVQNK LSLATPILPQ
VVQQLGLSVT KSSSSFLLVL AFNSEDGSMN KYDLANYVAS HVKDPISRIN GVGTVTLFGS
QYAMRIWLDP TKLTNYGLTP VDVTSAISAQ NVQIAGGQLG GTPAVPGTVL QATITEATLL
QTPEQFGNIL LKVNQDGSQV RLKDVAQIGL GGETYNFDTK YNGQPTAALG IQLATNANAL
ATAKAVRAKI DEMSAYFPHG LVVKYPYDTT PFVRLSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATIIPTI AVPVVLLGTF AIMSMVGFSI NVLSMFGLVL AIGLLVDDAI VVVENVERVM
AEEGLPPKEA TRKAMGQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVSAMVL
SVLVALILTP ALCATILKPI PQGHHEEKKG FFGWFNRTFN SSRDKYHVGV HHVIKRSGRW
LIIYLAVIVA VGLLFVRLPK SFLPDEDQGL MFVIVQTPSG STQETTARTL ANISDYLLTQ
EKDIVESAFT VNGFSFAGRG QNSGLVFVKL KDYSQRQSSD QKVQALIGRM FGRYAGYKDA
LVIPFNPPSI PELGTAAGFD FELTDNAGLG HDALMAARNQ LLGMAAKDPT LRGVRPNGLN
DTPQYKVDID REKANALGVT ADAIDQTFSI AWASKYVNNF LDTDGRIKKV YVQSDAPFRM
TPEDMNIWYV RNGSGGMVPF SAFATGHWTY GSPKLERYNG ISAMEIQGQA APGKSTGQAM
TAMETLAKKL PTGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVIG ALLAATLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQQTEKMGPI
EAALEAARLR LRPILMTSLA FILGVMPLAI SNGAGSASQH AIGTGVIGGM ITATFLAIFM
IPMFFVKVRA VFSGEKEDAD EALRLAHEHM HRDDKPEHGD DAGKKD
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