Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0832 |
Symbol | rfaF |
ID | 4900139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 814581 |
End bp | 815621 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640134062 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_001065113 |
Protein GI | 126454744 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGCG CGTTGGTTAT CGCACCGAAC TGGATCGGTG ACGCATTGAT GGCGCAGCCG CTTTTCGCGC TGCTGAAGAA ACTGCATCCC CGCATCGTCA TCGATGCCGT GGCGCCCGCG TGGGTCGCGC CCGTGCTCGA GCGGATGCCC GAAATCCACG ATGTCCACGC GACCGAGCTC GCGCACGGCA AGCTGCAGAT GCTGCACCGC TGGCAGCTCG CGAGCGACTT GCGCGAGCTC GGTTACGACG CCGCGTACGT GCTGCCGAAT TCGCTGAAAT CGGCGCTGAT TCCGTGGCTC GCCGGCATCC CGCTTCGGAT CGGCTACACG GGCGAGCATC GCTACGCGCT CCTGAACGTG CGGCATGCGA ATCCGGGCAA GGCGCGCGAG ACGCGCGCGC CGATGGCACA ACATTACGCG GCGCTTGCAT ACGCGCCCGG CGCGAAGCTG CCCGAATCGT TCCAGACGCT GCCGCCGCCG CGGCTCGATG CGGACCTGAA CGAGACGGCG CGCGTGTCGG CGCGCTTTAA CCTCGACACG CGCAAGCCGC TCATCGTGTT CTGTCCGGGC GCCGAGTACG GCCCGGCCAA GCGCTGGCCC CCCGAGCATT TCGCCGCGCT CGCGCAGAGC GTGAGCCAGT CCTTTCCGTA CACGCAGATC GTCGCGCTCG GCTCGCCGAA GGACGCCGCG GCCGCGCAGG CGATCGCCGA GCGCGCGCCG AACGTGCGCA GCCTCTGCGG CCAGACCTCG CTCACCGAGG CGTGCGCGCT GATCGCGCGC GCGAACGCGG TCGTCACGAA CGATTCCGGG CTGATGCACG TCGCGGCGGC GCTGCGCCGG CCGCTCGTCG CGCTCTACGG ATCGACCGAT CCGCGTCATA CCCCGCCGCT GTCGGAGCTG GCAAAGGTAC AATGGCTGCA TCTCGAATGC AGTCCCTGCT TCGAACGCGA ATGCCCGCTC GGCCACCTGA AGTGCCTGCG CGAGCTGAGC CCGGAGCAGG TGTTCGGCGA TTTGCGCGGG ATGCTCGTCG GACAGCGCTG A
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Protein sequence | MRRALVIAPN WIGDALMAQP LFALLKKLHP RIVIDAVAPA WVAPVLERMP EIHDVHATEL AHGKLQMLHR WQLASDLREL GYDAAYVLPN SLKSALIPWL AGIPLRIGYT GEHRYALLNV RHANPGKARE TRAPMAQHYA ALAYAPGAKL PESFQTLPPP RLDADLNETA RVSARFNLDT RKPLIVFCPG AEYGPAKRWP PEHFAALAQS VSQSFPYTQI VALGSPKDAA AAQAIAERAP NVRSLCGQTS LTEACALIAR ANAVVTNDSG LMHVAAALRR PLVALYGSTD PRHTPPLSEL AKVQWLHLEC SPCFERECPL GHLKCLRELS PEQVFGDLRG MLVGQR
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