Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0808 |
Symbol | |
ID | 4902138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 792799 |
End bp | 794157 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640134038 |
Product | phage integrase family site specific recombinase |
Protein accession | YP_001065090 |
Protein GI | 126451551 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.531832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGT TGCCCCACCT GTTCAAATCG CGCCACGGCG TCTTTTACCT CCGGCTCGCC TGCGGCGGCG AGGAGGTCAA GCGCTCGCTG CGCACGAAAG ACTTCCGGCA GGCTAGACTG TTGGCGCTCG CGTTCAATCT CGAACTCGCC ATGAAGACGC CGGACGACAA GCCGAAGGCC GCAGACTTCA ACCTCGACGC CGAATCGCTC AAACGGCTCG ACGTGATCTT CCCGGACGGC ACCCAGGTCA AGGACATCAA CACCGACGAC GACGTCCGCC GCGCCAAAGA GCTGTTCGGC GACCGCTTCG CCGCCGCCGT CCCGGCCCCG CCCTCGTTCG ACTTGCCCGC CTTCTCGCCG TCCGTCGCCG CCGCGATCGC CGCCCAGAAA GCCGTGCAGG AAACGAAGCG CAAGGCCAAG CCGTTCGCCG ACGTGGCGAA GCTCTACAAG AAGGAAAAGG CTCTCGACAA CACGGCGCGC ACGATCACGG CCAAAGAGCG GGCGTTCGCG GACTTCGAGA AGCGAATCGG CTCGCGGCCG ATCGACGCCT ACTTGATCGA CGACGCCGTT GCCTACAAGA ACGCTTTGAT CGACGAAGGC GGCAGCGCGA GCCGGATCAA CGCAAAGCTG TCGTTTCTGC GCGACCTGTT CGCCTACGCC CTGGCGAACG GCCTGCGGGC TGAGGCGAAC CCGTTCGAAA ACGTCAAAGT CTCGTCCAAG TCGAAGCTCG AACAGCAAAA GCGCTCCTAC AAACCGTTCA GCGCGGACGA CATCGCGACG ATCTTCGACC CGACGGCCTA TCCCGCGCGC ATGGACAAGC CGGCTTACCG TTGGTTTCCC TTCCTCGCGC TCTACTCCGG CGCGCGGCTC GAAGAGCTTG CCAGCCTGTC GCTGTCGCAA ATCCAGCGCG AGGGCGACGT TTGGTTCTTC GACATCCAGA AGGCGAAGAA CGCGAACTCC CAGCGGCGCA TCCCCCTGCA TCGCGTCGTA GTCGAGTCGG GTTTCCTCGC CTACGCGGAG GGTCTTCGCG AGCGTGGCGC GACGCAGCTA TTCCCGGAGT TGAAGCCGGG CGCGAACGGC TACGGAAAAA ACATCACGCG GCGCTTCGCG GACTATCTCG ACGAGCGCAA GATAACGGAC GACCGCAAGG TGTTCCACTC GTTCCGGCAC ACGTTCATCG GCCGCATGAC CGAGCTGAAC GTCCACCCGG CTATGCTCAT GGCGCTCGTC GGGCATTACG ATCAAGCGAA AGTCGATTTC AGCTCGCCGC ACTTCGCGAA CTACCAGCAC GTCAAGCCTC TCGCGGAGCT TAAAGCGACT CTCGACCGCT TTGACATTGA TTTGCCGATG GCTTTTTAG
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Protein sequence | MHKLPHLFKS RHGVFYLRLA CGGEEVKRSL RTKDFRQARL LALAFNLELA MKTPDDKPKA ADFNLDAESL KRLDVIFPDG TQVKDINTDD DVRRAKELFG DRFAAAVPAP PSFDLPAFSP SVAAAIAAQK AVQETKRKAK PFADVAKLYK KEKALDNTAR TITAKERAFA DFEKRIGSRP IDAYLIDDAV AYKNALIDEG GSASRINAKL SFLRDLFAYA LANGLRAEAN PFENVKVSSK SKLEQQKRSY KPFSADDIAT IFDPTAYPAR MDKPAYRWFP FLALYSGARL EELASLSLSQ IQREGDVWFF DIQKAKNANS QRRIPLHRVV VESGFLAYAE GLRERGATQL FPELKPGANG YGKNITRRFA DYLDERKITD DRKVFHSFRH TFIGRMTELN VHPAMLMALV GHYDQAKVDF SSPHFANYQH VKPLAELKAT LDRFDIDLPM AF
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