| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0784 |
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| Symbol | |
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| ID | 4903201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 767359 |
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| End bp | 769185 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640134014 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001065066 |
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| Protein GI | 126453020 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTG TGGCCGATTT CATCGTCGAG CGGCTTTACG ACTGGGGCGT GCGCCGCCTC
TACGGCTACC CCGGCGACGG CATCAACGGC ATGTTCGGCG CGCTGAACCG CGCCGACGGC
AAGATCGAAT TCGTGCAGGT GCGACATGAG GAAATGGCGG CATTCATGGC ATGCGCGCAT
GCAAAATTTA CAGGCGAGCT CGGCGTATGC ATCGCGACCT CGGGCCCCGG CGCATCGCAT
CTGGTGACGG GGCTGTACGA CGCGCGAATG GACCACATGC CGGTGCTTGC GATCGCAGGG
CAGCAGGCGC GCGCGGCGCT CGGCGGCCAC TACCAGCAGG AGCTCGACCT GAGCGCGCTC
TTCAAGGACG TCGCGGGCGC GTTCGTGCAG ACGGCGAGCG TGCCCGCGCA GGCGCGCCAT
CTCGTCGACC GCGCGGTGCG CACCGCGCTC GCGAACCGCA CCGTCGTCGC GCTCGTGCTG
CCGAACGATC TGCAGGAGCT CGACTACGAG CCGCCGAAGC GCCGGCACGG CACCGTGCAC
TCCGGCATCG GCTATACCGA TCCGCAGATC GTGCCGTACG AAGCCGACCT GCGCCGCGCG
GCCGACGTGC TGAACGCGGG CTCGAAGGTC GCGATGCTCG TCGGCGCGGG CGCGCTTCGC
GCGACCGACG AAGTGATCGC GGTGGCCGAC CGGCTCGGCG CGGGCGTCGC GAAGGCGCTG
CTCGGCAAGG CCGCGGTGCC CGACGAGCTG CCGTGGGTCA CGGGCTCGAT CGGGCTGCTC
GGCACCGAGC CGAGTTACCG GATGATGAGC GAATGCGACA CGCTGCTCGT CGTCGGTTCG
GGCTTTCCGT ATTCCGAATT CCTGCCGAAG GAAGGCGAGG CCCGCGGCGT GCAGATCGAT
CTGAAGGCGG ACATGCTGAG CCTGCGCTAT CCGATGGAGG TGAACCTCGT CGGCGACAGC
GCGCAGACGC TGCGCCGGCT GCTGCCGCTG CTCAACGAGC GCGCGGACGC GTCGTGGCGC
GCGCAGATCG CGCGCTGGAA CGCCGCATGG TGGAACACGC TCGACGCGCG CGCGCGCGTG
AACCCCGGCA ACGGGCGCGG CGTCAATCCG CAGCGCGCGT TCACCGAGCT GTCGCCGCGC
CTGCCCGAAT ACGCGATCGT GACGAGCGAT TCGGGCTCCT GCGCGAACTG GTATGCGCGC
GACCTGCGGA TGCGGCGCGG GATGATGTGC TCGCTGTCGG GCGGGCTCGC GTCGATGGGC
GCGGCCGTGC CGTACGCGAT CGCCGCGAAG TTCGCGCATC CGCACCGCCC GGTGATCGCG
CTCGTCGGCG ACGGCGCGAT GCAGATGAAC AACATGGCCG AGCTGATCAC GGTCGCGAAG
TACTGGAAGC AATGGGCCGA TCCGCGCTGG ATCTGCATGG TGCTCAACAA CGAGGATCTG
AACCAGGTCA CGTGGGAGCA GCGCGTGATG GAGGGCGATC CGAAATTCGA CGCGTCGCAG
CAGGTGCCGG ACGTGCCGTA CCACCGCTTC GCCGAACTGA TCGGCCTGAA GGGCGTGTAC
GTCGACGACG CCGACCAACT GGGCGCCGCG TGGGAGGACG TGCTCGCGGC GAACCGGCCG
GCCGTGCTCG AAGTGAAGTG CGACCCCGAG GTGCCGCCGC TGCCGCCGCA CGTGACACTG
CAGCAGGCGA AGCATTTCGC GCAGGCGCTG ATGCGCGGCG ATCCGCGCGA GCGCAGCGTG
ATCGTCGAGA CGGCGAAGCA GGTGCTCTCC GGCGCGTTCT CCGGCCGCGC GGACCGGACG
CGCGACGAGC CGGACGGCGA CGCATGA
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| Protein sequence | MATVADFIVE RLYDWGVRRL YGYPGDGING MFGALNRADG KIEFVQVRHE EMAAFMACAH
AKFTGELGVC IATSGPGASH LVTGLYDARM DHMPVLAIAG QQARAALGGH YQQELDLSAL
FKDVAGAFVQ TASVPAQARH LVDRAVRTAL ANRTVVALVL PNDLQELDYE PPKRRHGTVH
SGIGYTDPQI VPYEADLRRA ADVLNAGSKV AMLVGAGALR ATDEVIAVAD RLGAGVAKAL
LGKAAVPDEL PWVTGSIGLL GTEPSYRMMS ECDTLLVVGS GFPYSEFLPK EGEARGVQID
LKADMLSLRY PMEVNLVGDS AQTLRRLLPL LNERADASWR AQIARWNAAW WNTLDARARV
NPGNGRGVNP QRAFTELSPR LPEYAIVTSD SGSCANWYAR DLRMRRGMMC SLSGGLASMG
AAVPYAIAAK FAHPHRPVIA LVGDGAMQMN NMAELITVAK YWKQWADPRW ICMVLNNEDL
NQVTWEQRVM EGDPKFDASQ QVPDVPYHRF AELIGLKGVY VDDADQLGAA WEDVLAANRP
AVLEVKCDPE VPPLPPHVTL QQAKHFAQAL MRGDPRERSV IVETAKQVLS GAFSGRADRT
RDEPDGDA
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