| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0660 |
|---|
| Symbol | |
|---|
| ID | 4902165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 634541 |
|---|
| End bp | 635923 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640133890 |
|---|
| Product | putative sugar transferase |
|---|
| Protein accession | YP_001064942 |
|---|
| Protein GI | 126455454 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.304009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGAC TTTTGAATAA ATTGCTCGAT GTGGCGCTGG TCGCGGTGGG CGCGCTGCTG
GCGCAGATGC TGTACGACGG CGGCCTCTTC GATGTGTCCG ACGCGCAGCG CACGGCCATC
GCGCTGCTGT GCGCGCTGAC GCTGCTCGTC TTTGCGGCGA TCGGCGTCTA CGACGGCGCA
CGCGAGCAGA TGTCGTATCG CACGCTCTCG CGCGTGCTGC TCGGCTGGCT CGGCGTCGCG
GCGGCCGCCG CGGCCTTCAC GCTGCTGCTG CAGCGTGACG CCGACGTGTC GCTCGCGTGG
CTCGGCCGCA CGATGCTGAT GTCCGGCGCG GTGCTGCTGC TCGGCAGGGC GTCGATCCAT
GGCGTGCTGA ACGGCCTGCG CCGCACGGGC GCGAAGCCGC GGGCAGTCGC GATCGTCGGC
TCCGAAGTCT ATGGCCGCGC GGTGATCGAG CAACTGCGCG CGTCGTCGCT GCACGGCTAC
GAGGCTGTCT GCGTGTTCGA CGACAGCGCG CGCGCGGCCG ATGCCGAGCT TCGCGTGGGC
GGCGTGCCGG TCGTCTCCGA TCTGCGCGAG TTCAAGCGCC GCGTGCGCGC GGGTGCGATC
AAGGAAATCT GGCTCGCGCT GCCGCTGTCG CACGAGCGAC GGATTCAGCG GATCGTGCGC
GAGTTTCGCC ACGATTTCGT GAACCTGCGC TTCCTGCCCG ACGTGCGCGG GATCACGTTC
TTCAACCGCT CGGTCGCGCA GGTCGCGGGC ATGCCCGCGA TCAACCTCGC GACGAGCCCG
CTGTCGATTC CGCAGCTCTG GCCGAAGTTC ATCTTCGATC GCCTGTTCGC GCTCGCCGTG
CTGATTCCGC TGTCGCCGAT CCTCGCGGCG CTCGCGCTCG CGGTGAAGCT CTCGTCGCCG
GGGCCCGTGC TGTTCCGGCA GAAGCGCAAG GGCGTCGACG GCCGCGAGTT CGAGATCCTG
AAGTTCCGCA CGATGCGCGT GCACGCCGAG GAGACGGGCG TCGTGCGCCA GGCGTCGCGT
AACGATTCGC GCATCACGAA GGTCGGCGCG TTCCTGCGCC GCACGTCGCT CGACGAGCTG
CCGCAGTTCT TCAACGTGCT GTTCGGCCAG ATGTCCGTCG TCGGTCCGCG TCCGCACGCG
ATCGAGCACG ACGACCTCTA CAAGGAGCTC GTCGACGGCT ACATGTACCG CTATCGCGTG
CGTCCCGGCA TCACCGGCTG GGCGCAGGTG AACGGGTATC GAGGCGAGAC GCGCAAGGTC
GAGAAGATGG CCGCGCGCGT GAAGTTCGAT CTTTTCTACA TGCAGAACTG GACCTTCTGG
TTCGACATCA AGATCATCCT GATCACGCTC GTCAAGGGTT TCGTCGGCCG CAACGCATTC
TGA
|
|---|
| Protein sequence | MVGLLNKLLD VALVAVGALL AQMLYDGGLF DVSDAQRTAI ALLCALTLLV FAAIGVYDGA
REQMSYRTLS RVLLGWLGVA AAAAAFTLLL QRDADVSLAW LGRTMLMSGA VLLLGRASIH
GVLNGLRRTG AKPRAVAIVG SEVYGRAVIE QLRASSLHGY EAVCVFDDSA RAADAELRVG
GVPVVSDLRE FKRRVRAGAI KEIWLALPLS HERRIQRIVR EFRHDFVNLR FLPDVRGITF
FNRSVAQVAG MPAINLATSP LSIPQLWPKF IFDRLFALAV LIPLSPILAA LALAVKLSSP
GPVLFRQKRK GVDGREFEIL KFRTMRVHAE ETGVVRQASR NDSRITKVGA FLRRTSLDEL
PQFFNVLFGQ MSVVGPRPHA IEHDDLYKEL VDGYMYRYRV RPGITGWAQV NGYRGETRKV
EKMAARVKFD LFYMQNWTFW FDIKIILITL VKGFVGRNAF
|
|---|
| |