Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0641 |
Symbol | |
ID | 4901056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 611783 |
End bp | 614146 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640133871 |
Product | diguanylate cyclase/cyclic diguanylate phosphodiesterase |
Protein accession | YP_001064923 |
Protein GI | 126453370 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.593347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTTCGG CCGTCGCGGT TGCACTGGCG GTTGCGTTGC TCGGCGCGGC GCTGCTGTCC GTCGAGCGGT TCGGCGCCGC GCGAAGCCGC GCGTCGGCCG CGATCCCGGC GAGCATCGGC GCGCGCCTGA GCGGCTGCGC GTTCATCGCC GTGCGCATCG GCGCGGCGCT GTCGCGGCGC GCGCCGTCGC CGGCGCATGC GGCGGCGCCT GGCGTTGCGC GGCCGGATTT CGACGCGATC GAACGCGTGT TCGGCCCGAT CCGCATGCGC GAGCGGCGCG CACATGGCGC GACGTGCACC GCGGACGCGC CGGACGCGTC GCACGCAGGG TGGATCGAAC CCGCGCGCGC GTGCTCGGCC GCCGCGCATG CGGCGCCGGG GCGCGGCGCC GAGGGCGCGC CGAACACGAT GCCGGGGCCG TCCGAAGCGG GCGCCGCGGC GGTCCCACAA TCGCAACCGT ACCTGGACAT GATCGATTCG ACGTTTCGCG AACCGGCGGC CATCGTGCTC GCTTTGAGCC TGCTCGGCAT GATCGCGCTC GCACTGCTGC CCGTGTTCCG GATCAGGCGG CTCGCGCTTC GCCTCGGCGA GGCGCAGGGA GCGCTCGAGA TGAGCGAAGC GCGCGCCCGC GCGGCGCTCG TCGCCGTCGG CGACGGCGTG ATCTTCACCG GCCGGGCGGG GCGCGTCGAA TGCCTGAATC CGGCGGCGGA GCGATTGATC GGCATGCTCG CCGACGATTG CCGCGGCCGT CCGCTCGTGT CGACGCTGCG GCTGTCGCGC ACGGCCACGT CCGCTTCGTC CGGCGCGTTC GCCGCGTCCG CCGGGCTCGA CGCGCCGGAT TCGCCGGGCT CGGCCGCCTC GCCCGATGCG CCGCTCGGCG ATCTCGAGGA CGGCGGCAGT TGCGACGCGA CGCTCTACCG CGCGGACGGC GGCGCGATCG CCGTGCGCGC GACCGCGTCG TCGATCGCGC CGCCGCCGGG GCATGCGCGG CGCGCGTGCG GCAGCGGCCG CGTGCTCGTG CTCAAGAGCC TCGCGACCGA GCACGAGCTC GTGCGCCGCC TCGCGTGGCA GACAACGCAC GATCCGCTCA CCGGCCTGGC GAGCCGCGCA GAGTTCGAGC GTCACGTTGG TTTCGCGCTC GCCGCCGACG TGCGCGAGCC GGTCGCGCTG CTGTTCGTCG ACCTGGATCG CTTCCGGATC GTCAACGATA CGTGCGGCTA CGCGGCGGGC GACGCGATGC TCGCCGCGCT CGCCGCGCGT CTCGTGTCGT GCGCGGCGTC GGCCGACGTC GTCGCGCGGC TCGGCGGCGA CGAATTCTGC GTGCTGCTCG ACGCCCGCGA CGAAGCGTCG GCCGTGAGCG CGGCCGAGCG CCTGCGCGCG AGCGTCGACG GCTTCGTGTT CGTCTGGGAC GGCCAGCCGT TCTCGGTGAC GGCGAGCGTC GGCGTCGCGC TGCTCGGCGG GCCGGGCCGC GCGCCGCGCG TCGAGGATGC GGTGCGGCTC GCCGGCATCG CGTGCGACGT CGCGAAGGCG CGCGGGCGCA ACCGCGTGCA ACTGGCCGAT CCGCACGATC ACGAGCTCGC GCACCACATC AGCGACGTAT CGTGGTGCGC GCGCGTGAGG CAGGCGCTCG AATACGACGA TTTCCGCCTG TACGTGCAGC CGATCGTCGA TACGGCGACG CAGGGTGCGA CGGGCCTGCC GCGCGCGAGG CGCGGCGAGC TGCTGCTGCG CATGGGCGCG CTCGGCGAGC GCGAGGGCGT CGCGCCGCCC GGCCTTTTCA TCCGCGCGGC CGAGCGCTAC GGGCTCGTCA CCGACATCGA CCGCTGGGTC GTGCGCACGG TGCTCGACGC GCTCGCTCGC ACGCGCAGCC GGCGCTTCAG CGAATACGCG ATCAATCTGT CGGGGATCTC GATCGGCGAC GAGCGCTTTC TCGACTATGT GCTCGAACAG TTCGCGCGCA CGCGCGTCGC GCCCGCGCTC ATCTGTTTCG AGATCACCGA GACGGCGGCG ATCGCGAACC TGGCCGGCGC GCTGCGCTTC ATGCACGAGC TGAAGGCGCT CGGCTGCCGG TTCGCGCTCG ACGATTTCGG CTCCGGGATG GCGTCGCTCA GCTATCTGAA GCAACTGCCC GTCGAGTACC TGAAGATCGA CGGCAGCTTC GTGACGGGCA TCGCGAACGA TGCCGCGAGC CTCGACATCG TCGCGTCGAT CAACGACATC GGCCACGCGA TGAATTGCAA GACGATTGCC GAGTACGTCG ACAGCGCGGC GACGCTGCAA AAGCTCGCCG CACTCGGCGT CGATTATGCG CAGGGCTACT ACATCGGCCG GCCCGTGCCG TGGTGCGAGG CCGCGCGCGC GTAG
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Protein sequence | MRSAVAVALA VALLGAALLS VERFGAARSR ASAAIPASIG ARLSGCAFIA VRIGAALSRR APSPAHAAAP GVARPDFDAI ERVFGPIRMR ERRAHGATCT ADAPDASHAG WIEPARACSA AAHAAPGRGA EGAPNTMPGP SEAGAAAVPQ SQPYLDMIDS TFREPAAIVL ALSLLGMIAL ALLPVFRIRR LALRLGEAQG ALEMSEARAR AALVAVGDGV IFTGRAGRVE CLNPAAERLI GMLADDCRGR PLVSTLRLSR TATSASSGAF AASAGLDAPD SPGSAASPDA PLGDLEDGGS CDATLYRADG GAIAVRATAS SIAPPPGHAR RACGSGRVLV LKSLATEHEL VRRLAWQTTH DPLTGLASRA EFERHVGFAL AADVREPVAL LFVDLDRFRI VNDTCGYAAG DAMLAALAAR LVSCAASADV VARLGGDEFC VLLDARDEAS AVSAAERLRA SVDGFVFVWD GQPFSVTASV GVALLGGPGR APRVEDAVRL AGIACDVAKA RGRNRVQLAD PHDHELAHHI SDVSWCARVR QALEYDDFRL YVQPIVDTAT QGATGLPRAR RGELLLRMGA LGEREGVAPP GLFIRAAERY GLVTDIDRWV VRTVLDALAR TRSRRFSEYA INLSGISIGD ERFLDYVLEQ FARTRVAPAL ICFEITETAA IANLAGALRF MHELKALGCR FALDDFGSGM ASLSYLKQLP VEYLKIDGSF VTGIANDAAS LDIVASINDI GHAMNCKTIA EYVDSAATLQ KLAALGVDYA QGYYIGRPVP WCEAARA
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