Gene BURPS1106A_0622 details

Gene Information

• Locus tag: BURPS1106A_0622
• ID: 4900203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 589117
• End bp: 595212
• Gene Length: 6096 bp
• Protein Length: 2031 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640133852
• Product: FG-GAP/YD repeat-containing protein
• Protein accession: YP_001064904
• Protein GI: 126453108
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3209] Rhs family protein

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCAAGA CAAGCGGTAC CGCCGACGAG ATCCTGAACC TGCCTTCGGG CGGCGGATCG 
GTCAGCGGCG ATGGCGGCGA TTTCAGCGTC GATCTGAACA CGGGCACCGC GACGCTGAAG 
TTCGATCTGA CGGTGCCGGC CGGCCCGAAC GGCATCACGC CGCCGCACAC GCTGCAGTAT 
TCGGCGGGCG CGGGCGACGG AGCGTTCGGC ATCGGCTGGT CGCTCGGGCT GATGACGATC 
CGCCGCAGGA TCACGCCGGC AACGGGCGCG GCCGAGCCCG CGCCGCCCGG CGCGTGCTCG 
CTCGTCGGCG TCGGCGAGCT CGTCGACATG GGCGCGCGCC GCTTTCGGCC GATCGTCGAC 
GCGACGGGGC TGCTGATCGA ATTCACGGGC GCGTCGTGGA CGGCCACCGA CAAGACCGAT 
ACGCAGTACA CGCTCGGCAC GAGCGCGAAC GCACGGATCG GCGGCGGCGC GCTGCCCGCC 
GCATGGCTCG TCGATCGCTG CGCCGACAGC GCGGGCAACG CGATCGCGTA CACGTGGCTC 
GACGTCGGCG GCGCGCGCGT GCCGCAGGCG ATCGCATGGG GCACGTATCG GCTCGACTTC 
GTGTACGAGG CGCGGCCCGA CGTGCTCGTC GACGGCAGCT ACGGCGCGCC CGTCACGCTC 
GACAAGCGCT GCGCCCGCAT CGAGCTGCAC GCGACGACCG AGGCGCCCAG CCTCGTGCGC 
AGCTGGACGC TGCTGTACGA CGACGACGGC GGCCGCGGCC GCTCGCTGCT CGCGACGATC 
CGCGAACAAG GCCACGCGGC CGACGGCTCG ATCCTCGCCG CGCCCGAGCG CACGTTCGCG 
TACTCGTCGC CCGGCGCGCC CGCGCTCGTG CCGGTGACGG GCTGGACGAC GCCGCTGTCG 
GACCCGAACA CCGATCTCGT CGACCTGAAC GGCGACGGGC TGCCCGACAT CGTGCACCTT 
GGCCATGGCA TGCCGACGAT GCATCCGAAC CTCGGCGGCG GACAGTTCGG CGCGCCGCGC 
CCGCTCGCGC GCACCGCCGC CCCGCTGCGG CTGTCCGCGC CCTCGGTCGC GTTCGCGGAC 
ATGTCGGGCA ACGGCAGCGT CGACGTGCTC GTGCTCGACG CGCCGTTCTC CGGCTACTAC 
CCGCTGGCCG CGCCGGGCGG CTCGGCGCCC GCGGGCTTCG GCCGGCCGAT CGTGTTCGAG 
CGCGCGCCCG CCGTCTCGCC GAGCGACGTG CGGCTGCGCT TCGTCGATCT GAACGGCGAC 
GGCATCACCG ACATCCTGCT CGACACCGGC CGCGGCTGGC TCGCGTATCT GCGCGACGGC 
CCGGCGAGCT GGTCCGACGC GCCGCGCGTG CTGCCGCCCG CGCGCACGCC GCCCGTGTCG 
CTCGCCGATC CGCACGTGCA TCTCGCCGAC ATGACGGGCG ACGGGCTGAT GGACATCGTG 
CGCGTGACGG GCGGCGGGTT CACGTACTGG CCCGCGCGCG CGGACGGCGG CTGGGACGCG 
GCGATCGCGA TGACGCCTTC GCCCGCGTTC GGGCGCGATT TCGATCCGCA CCGGCTCGCG 
CTGTACGACG TCGACGGCGA CGGCTGCGCG GATCTCGTCT ACGTCGGCCT GCAATCCGTC 
ACGCTGTGGC GCAACGTCGG CGCGACGCGG CTCGCCGCGC CCGTGGCGAT TCCCGGCACG 
CCGGTCGCGC TGCCGGGCAG CTACCGGATC GTCGATCTGC TCGGCTCGGG CACGGCGGGC 
GTGCATTTCC AACTGCCGTC GATCGCGGGC GCGTCGCGCC AGAGCTATCT CGATCTCGGC 
GGCGGCGTGA AGCCGTATCT GCTGACCGAT CTCGCGCACG GCGCGGCGCA AAGCACGCAT 
ATCGGCTACC GCACGAGCAC CGAGTACGCG CGCGACGACG CGCAAGCCGG CGCGCCGTGG 
CGAACCTATC ATCCGTTTCC GATCCAGTGC GTCGCGCGCA CCGACCAGAC CGACCACGGC 
ACCGGCGCGA CGACGTCGAC CCGCTACGCG TATCACGACG CGCGCTACGA TCCCGCGACG 
CGCACGTTCC TCGGCTTCGG CCGCGTCGAC AGCGAGCAAC TGGGCGACGC GTCGTGCCCG 
ACGCTGCGCG TCGAGACGAC CTTCCACCTC GGGCTCGATC CGGCCGACCC GGCCCGCCCG 
CTGACGGGCG ACGAAGCGCT GAAGCTCGGC GCGCTGCGCC GCAAGCCGCT CGTCACCGCG 
ACGTACGGGC TCGACGGCTC GCCGCTCGAG CACCGCCCGT ATTCGATCAC GCGGCACGCG 
TACGACGCGC TGCTCGTCGC GTCGACGGCG GATAACGGCA AGCGGATCGC GGTGCCGTAC 
TGCACGACGT CGACCGAGGA GCGCTGGGAA CGGCAGAGCG CCGCCGTATC GGCACGCACC 
GTCGACTATC TCGCGATCAC GAGCGAAGGC GACGTCACGT CGCAACGCAC GCGCGCGCAG 
CGCGCCGGCA TCGCCGCGCC CGACCAGGAC GTGACGACGA CGACGACGCT CGCCACGGGC 
GGCAAGAACC TGAGACTGCC GGCGCGCGTC ACGCAGACCG CGCCCGGCGG GGACATCGTG 
TCCGAATCGA TCTGCTTCTA CGATGGCGAC GCGTTCGCCG GCTTGCCCGA AGGCCAGGCG 
ACGCGCGGGC TCGTCACCCG CATCGAAGAT CGCGTGTTCG ACGACGCGTT CGTCGCGTCG 
GTCTGGGGCG ACACCCCGCC CGACCTCACG CAGTACGGCT ACCACCGGCT GCCGGGCGAA 
GCGGGCAGTT GGTGGAAGAC CCGGCGCGCG CACGCGCGGG GCGCGAACGC GAGCGGGCCG 
ACGCTCGCGA CGAAAGGCCC GCTCGGCGCG CTGCAGACGC TGCAATACGA CGCGAGCGGC 
CAGCGCGTCG TCAAGGTGAT CGACGCGCTC GGCAACGCGG TGGCGGCCAC CACCGATGCG 
CGCGTGTTCC AGACCGCCTC GCTCACCGAC GCAAACGGCC ACCGGACGGC CGACGCGTTC 
GACGCGCTCG GCCGCGTCGT CGCGACGATC GGCCCGCTCG ACACGCCCGC GCTGCCGACG 
ATCGCGTTCA CGTACACGGT GGGCGCGATC TCGACCGTCA CGAGCGCGAC GCGCGGCACG 
CACGGCGGCG CGGACGCGGT GCCGGCGCTC ACGTGGATCG ACGGCGCCGG CAACGTGCTC 
GGCAAGGGCA CGCCCGCCGC CGCGCCCGGC GAGTGGACCG TCACCCACGC GGTGCGGCGC 
AACGCGCGCG GCCTCGTCGC CGCCTCGTTC CTGCCGTACG CGGCGACGGG CGCAAACTGG 
CAGCCGCCGC CCGCGGACAC CGGCGCGACG ACGTCGACCT ACGACGCGCT CGGCCGGCTC 
GTGCAGCTCA CGCGGCCGGA CGGGCTCGTC GTCACGAGCC GCCGCGAAGG CGACACGCTG 
ATCACGAGCG AAACCTGGCC GGGCGGCGCC GCGCTCGACG TCGAGCGGCA GGTGTACGAC 
GCGGCGGGCC AGCTCGTATC GGTCTCGCGC AACGCGGGCG ATCACTGGGT CGAGCAGCGC 
TACGCGTACG CACCGTCGGG CAAGGTCCGC GACGTGACGC TGCCGGGCGG CGCGCACGTC 
GCGTTCACGC TCGACCTGCT CGGCCGCGTG TTCGCGCAGC AAAGCCCCGA CACGGGCCGC 
ACCGTGTTCC TCCTCGACGC ATCGGACAAC CAGCGCGCGC GCACGAACGC GGCGGGCCAG 
ATCGTGCGCA CCGAAGTCGA CGCGATGAAC CGCGCGACGA ACGTGTATCA CGACGCGGAG 
CCGGCGCCGC GCGTGCGCTA CGAGTACGCC GACGCGAGCG GCGCGCCGCC CGCGGACGGC 
ATCGTCGCGA ATCGCTACAC GCGCCTCTGG CGGATCACCG ACGAGATCGG CACGGTCGAC 
TTCGAATACG ACGAAGCCGG CCGCAAGACC GCGACGACGC GCACCGTCGC GGCCACCGGG 
CAGCGCTTCG TCACGCGGCG CGCATACGAC GCGCTCGGCC GCCTCGCGCG CGCGACGCTG 
CCCGCGAGCG CGCCGGGCGG CGCCGCACGC ACGATCGCCT ACGGCTATGC GGCCGACGGG 
CGGCTCGTCA GCGCATCGGG CGTCGTGAAG GACGCGGCCT ATGATCGGTT CGGACGCCTG 
ACCTCGATCG ACTACGAGAA CGGCGCGTCG ACGCTGATCG ACTACGCGGC GAACGCCGGC 
GGCATCGCAC GCGTGCGCGT GCTCGACGCC GCGCGCAACG TGCTGCGCGA CACGACGCTC 
ACGCGCGGCG GCGGCCTCGT GCAGACGCTC GCGAGCGCGC ACGCCGGCGA CGACAGCGTC 
GACTTCGGCT ACGACCCGCT GCGCCGCCTG ACGAGCGCGC ACTACCGGCA AGGCGCGACG 
GCCGCCGATG CGCACGACTG GACCTTCGAC GACGCATTCA ACGCGACGGC CGCCACCGAT 
GCGGGCGTGC TGACGTACGA GCCGGGCACG CACCGGCTCG CGTCGGTTGG CGGCGCGGCG 
GTGGCGTTCG ATGCCGCCGG CCGGATGACG AGCGGGCGCT TCGGCGCGGC GACGTTCGAC 
GCGGCCGATC ACCTGAGCGC CGTCACGCTG CCGGACGCGA CGCACATCGC GCACATGTAC 
GACTACCAGG GCCGCCGCGT GCGCTCGACG AAGAACGGCG CGCAGACGTA TTTCAGCCCG 
ATCGAAGACA TCGAGTTCCA GGGCGACACG GCGATCGTGT GGATCACGTT CGGCAAACAA 
CGGATCGCAG CCGACATCGG CGGCGCGCTG ACGTTCGTGC ATCCGAACGC GCTCGGCGTG 
ATGGATCTCA TCACCGATTC GGGCGGCGCA TACGGCACGC GCGTGCGGCA GACACCGTTC 
GGCTACGCGC GAGCGGCCGA CGGCGCGGCG CCGGCGGGCG GCGTCGCGGC GGTGGCGCTC 
GCGCTGGGCG CGGCGGACGC GACGGGCCTC GTATGCCACG GCCTGCGATG GTACGACCCG 
CGCGTCGGCC AGTTCATCAG CCCGGACCCG GTGGTGACGA GCGTCTATAC CGTCGGCGCG 
TGGAACCCGT ACGTGTACTG CCTCGGCAAT CCGATCCTGC TCGCCGATCC GAACGGCTGC 
AGCTTCCTGA GCGTGCTCGA GATCATCGGC GTCGCGATCC TCGCGGCGGC CTGCGTCGTC 
GGCGCGATTT TCACGGGCGG CGCGACGCTC GTCGCGCTCG GCGTGCTGTC CGCGAACATC 
GGCGGATGGC TGCTCGCGGG CGTGGCGCTC GGCAGCCTCG GCGGCGCGAT CGCGGGCGAG 
CTCGCCGCGC AGAAGGCGGG CGGCAACCTG TGGGCGGGCG CGTTCCTCGG CGCATTCCTC 
GGCGGCGCGA CCTCGCTGAT CGGCGGCGCG CTCGGCGGCG CGGCCGCGGC CGGCATCGAC 
ACACTGATCG GCGGCACGAA GACGTTCCTG TCGTTCGTCG CGGCGGGCGC GATCCAGGGC 
ACGCTCGCGG GCGCGGGCAC GGGGCTCGCG ATCGGGTACG CGGGCGGCAA GGGCAATGCC 
GAATCGATGT TGATCGCGAT GGCCAAGGGC GCCGCATGGG GCGCGGTGCT CGGCACGCTG 
CTCGGCGCGG GGATCGGCGC GATCGCGGGC ACGGGCATCA GCGGCGCGGC GAAGCCGGAC 
AACTTCCTGA ACATTGGTGC GTTCGGCCAG AAGTTCGCGG ATTTCACGAG CACATCGACG 
GCGATCAACT CGGCCGACAA CGCGGCGGGC GTGACCGAAT CGCTCGCGCA GCTTTCGATG 
CCGAACGGTT TCAACGCGGG CAACCTGCTC GGCCTGCTGC CGAACCTCGT GACGACGAAC 
GAACAGGCGG CCGGCTGGTT CTCGATACCG ATCGGCTGGC TCGGGCCGGG CGTGCTGAAC 
GACGCGGGGT TCGCGGGGCT CGTCGATACG TCGATGGCGC TCGACCAGGC GGGATTCAGC 
TACGCGCACC AGATCTCGCT GCTGCTCGGC GCGGCGCCCT ACTTCATCGA CTACGCGGCG 
ACGATGGCGC AGATCGTCGA TGCGAACGGC GTGAACAACT TCGAGATGGC GTTCAACAAC 
GCGTTCGGGT CGGGGAGCCC GAGCAATACG GGGTGA 

 

Protein sequence

MAKTSGTADE ILNLPSGGGS VSGDGGDFSV DLNTGTATLK FDLTVPAGPN GITPPHTLQY 
SAGAGDGAFG IGWSLGLMTI RRRITPATGA AEPAPPGACS LVGVGELVDM GARRFRPIVD 
ATGLLIEFTG ASWTATDKTD TQYTLGTSAN ARIGGGALPA AWLVDRCADS AGNAIAYTWL 
DVGGARVPQA IAWGTYRLDF VYEARPDVLV DGSYGAPVTL DKRCARIELH ATTEAPSLVR 
SWTLLYDDDG GRGRSLLATI REQGHAADGS ILAAPERTFA YSSPGAPALV PVTGWTTPLS 
DPNTDLVDLN GDGLPDIVHL GHGMPTMHPN LGGGQFGAPR PLARTAAPLR LSAPSVAFAD 
MSGNGSVDVL VLDAPFSGYY PLAAPGGSAP AGFGRPIVFE RAPAVSPSDV RLRFVDLNGD 
GITDILLDTG RGWLAYLRDG PASWSDAPRV LPPARTPPVS LADPHVHLAD MTGDGLMDIV 
RVTGGGFTYW PARADGGWDA AIAMTPSPAF GRDFDPHRLA LYDVDGDGCA DLVYVGLQSV 
TLWRNVGATR LAAPVAIPGT PVALPGSYRI VDLLGSGTAG VHFQLPSIAG ASRQSYLDLG 
GGVKPYLLTD LAHGAAQSTH IGYRTSTEYA RDDAQAGAPW RTYHPFPIQC VARTDQTDHG 
TGATTSTRYA YHDARYDPAT RTFLGFGRVD SEQLGDASCP TLRVETTFHL GLDPADPARP 
LTGDEALKLG ALRRKPLVTA TYGLDGSPLE HRPYSITRHA YDALLVASTA DNGKRIAVPY 
CTTSTEERWE RQSAAVSART VDYLAITSEG DVTSQRTRAQ RAGIAAPDQD VTTTTTLATG 
GKNLRLPARV TQTAPGGDIV SESICFYDGD AFAGLPEGQA TRGLVTRIED RVFDDAFVAS 
VWGDTPPDLT QYGYHRLPGE AGSWWKTRRA HARGANASGP TLATKGPLGA LQTLQYDASG 
QRVVKVIDAL GNAVAATTDA RVFQTASLTD ANGHRTADAF DALGRVVATI GPLDTPALPT 
IAFTYTVGAI STVTSATRGT HGGADAVPAL TWIDGAGNVL GKGTPAAAPG EWTVTHAVRR 
NARGLVAASF LPYAATGANW QPPPADTGAT TSTYDALGRL VQLTRPDGLV VTSRREGDTL 
ITSETWPGGA ALDVERQVYD AAGQLVSVSR NAGDHWVEQR YAYAPSGKVR DVTLPGGAHV 
AFTLDLLGRV FAQQSPDTGR TVFLLDASDN QRARTNAAGQ IVRTEVDAMN RATNVYHDAE 
PAPRVRYEYA DASGAPPADG IVANRYTRLW RITDEIGTVD FEYDEAGRKT ATTRTVAATG 
QRFVTRRAYD ALGRLARATL PASAPGGAAR TIAYGYAADG RLVSASGVVK DAAYDRFGRL 
TSIDYENGAS TLIDYAANAG GIARVRVLDA ARNVLRDTTL TRGGGLVQTL ASAHAGDDSV 
DFGYDPLRRL TSAHYRQGAT AADAHDWTFD DAFNATAATD AGVLTYEPGT HRLASVGGAA 
VAFDAAGRMT SGRFGAATFD AADHLSAVTL PDATHIAHMY DYQGRRVRST KNGAQTYFSP 
IEDIEFQGDT AIVWITFGKQ RIAADIGGAL TFVHPNALGV MDLITDSGGA YGTRVRQTPF 
GYARAADGAA PAGGVAAVAL ALGAADATGL VCHGLRWYDP RVGQFISPDP VVTSVYTVGA 
WNPYVYCLGN PILLADPNGC SFLSVLEIIG VAILAAACVV GAIFTGGATL VALGVLSANI 
GGWLLAGVAL GSLGGAIAGE LAAQKAGGNL WAGAFLGAFL GGATSLIGGA LGGAAAAGID 
TLIGGTKTFL SFVAAGAIQG TLAGAGTGLA IGYAGGKGNA ESMLIAMAKG AAWGAVLGTL 
LGAGIGAIAG TGISGAAKPD NFLNIGAFGQ KFADFTSTST AINSADNAAG VTESLAQLSM 
PNGFNAGNLL GLLPNLVTTN EQAAGWFSIP IGWLGPGVLN DAGFAGLVDT SMALDQAGFS 
YAHQISLLLG AAPYFIDYAA TMAQIVDANG VNNFEMAFNN AFGSGSPSNT G