| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0589 |
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| Symbol | |
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| ID | 4902199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 556984 |
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| End bp | 558804 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640133819 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001064871 |
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| Protein GI | 126452823 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0397506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGC CCTTGAAGCT GTCCCAGAAG CGCCTTGCCG CTGCGCGCGG CCCGCGCGCC
GTTCCGGTGC GCCGCGCGAT CGGCGCCGCG CTCGTCGCGG CGTGGGCGCT CGCCGCGCTC
CCCGCTCACG CGCAGGACGA CGCAGGCGAC GACGCCCCCC AGGCCGCGTT CGCGTCGGCG
CTGCCGGAAG AGCAGAAGGA TCTGCCGAAC GTCGCGCTGA CGAGCCAGAT CGTCTACCAG
GTGCTCGCGG CCGAGGTCGC GCTGCAACGC AGTCTTCCCG CGCCAGCCTA TCAGACCTAC
CTCGCGCTCG CGCGCGACAC GCGCGATCCG CGGATGGCGC AGCGGGCGAC CGAGATCGCG
CTCGCCGCGC AGAGCCCGGC GGACGCGCTG ACGGCCGCCA ATCTGTGGCG CGAATATTCG
CCGGGTTCGC AGCGCGCCGC GCAGGTCGAC GCCGCGCTCC TCGTGCTCGG CGGCAAGCCG
GCCGAAGCGC AGCCGATGCT CTCGCAAGAG CTCGCCCGCG CAACCGGCGA GAATCGCGGC
CAGGCGATCA TCGCGCTGCA GGCGCTGCTC GCGCGCGGGC CGAACCGCGT CGGCGGCCTG
ACGGTGCTCC AGGATCTGCT GAAGAACGAC ATGGGCCGGC CCGAGGCGCG GCTCGCGATC
GCGCGCCAGC AACTCGCCAC CGACGACAAG GACGGCGCGA CGCAATCGCT GAAGGAAGCG
CTGCGCATCA AGCCCGATTA TCTGCCGGCG GCGCTGATGC TGTCGCAGAT GGGCCCGGGC
GAGCGCGCGG CCGGAATCGC GTCGTTCGAG AAGTTCGTCC AGCAGAATCC GAAATCGCGC
GACGGCCGCC TCGCGCTCGC GCAACTGTAT CTCGCCGACG ATCGCCTCGA CGACGCGCAA
AAGCAGTTCG ACGCGATGCG CCGCAACGAT TCGAGCGACC CGACGCCGCT GATGGCGATT
GCGCTCATCA AGATCCAGCA GAAGCACCTC GACGACGCGA CGACGTACCT GAAGCAATAC
GTGAAGGTCG CGCAGAAGAA GCCGGGCGCG GACGTCGGCC AGGCGTACGT GTATCTCGCG
CAGATCGCGC TCGACCAGAA CAACGAGGCG CTCGCCGCGC AATGGCTCGA CAAGGTCGAC
GAAGCGAGCC AGCAGTACGT ACCCGCGCAG GTCACGCGCG CGCAGTTGCT GCAGAAGCAG
GGCAAGGCCG ACGAAGCGCG CAAGCTGCTC GCGAACCTGC AGGCGTCCGA CCCGCGCGAC
GCCGCGGTGA TCGCGCGCAC CGACGCGTCG ATCCTCTTCA CGTCGAAGCG CTACAAGGAA
GCCGCCGACC GGCTCGCGCA AGCCGTGGAG GATTTCCCGG ACGATCCCGA TCTGCGCTAC
GACTACGCGA TGGCGAGCGA GAAGATCGGC CAGTACACGA CGATGGAACA GCAGTTGCGC
CTGCTGATGC GTGCGCAGCC CGACAATCCG CAAGCCTACA ACGCGCTCGG CTATTCGCTC
GCGGACCGCA ACCTGCGCCT GCAGGAAGCG AGCAAGCTGA TCGAGAAGGC GAACTCGCTC
GCGCCGAACG ACGCGTTCAT CATGGACAGC CTCGGCTGGG TCAAGTATCG CCTCGGCGAC
ACGGCGGGCG CGACGGCGAT CCTGAAACGC GCTTACGACC TGCAGCCGAA CGCGGAAATC
GGCGCGCACC TGGGCGAAGT GCTGTGGAGA AGCGGCTCGC GCGACGAAGC GCGCGCCGCA
TGGCGCGCGG CGCAGAAGCT CGAACCCGAC AACGATACGC TCGTGCAGAC GCTCAAGCGC
CTTCAGGTGA ACGGACTTTG A
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| Protein sequence | MTLPLKLSQK RLAAARGPRA VPVRRAIGAA LVAAWALAAL PAHAQDDAGD DAPQAAFASA
LPEEQKDLPN VALTSQIVYQ VLAAEVALQR SLPAPAYQTY LALARDTRDP RMAQRATEIA
LAAQSPADAL TAANLWREYS PGSQRAAQVD AALLVLGGKP AEAQPMLSQE LARATGENRG
QAIIALQALL ARGPNRVGGL TVLQDLLKND MGRPEARLAI ARQQLATDDK DGATQSLKEA
LRIKPDYLPA ALMLSQMGPG ERAAGIASFE KFVQQNPKSR DGRLALAQLY LADDRLDDAQ
KQFDAMRRND SSDPTPLMAI ALIKIQQKHL DDATTYLKQY VKVAQKKPGA DVGQAYVYLA
QIALDQNNEA LAAQWLDKVD EASQQYVPAQ VTRAQLLQKQ GKADEARKLL ANLQASDPRD
AAVIARTDAS ILFTSKRYKE AADRLAQAVE DFPDDPDLRY DYAMASEKIG QYTTMEQQLR
LLMRAQPDNP QAYNALGYSL ADRNLRLQEA SKLIEKANSL APNDAFIMDS LGWVKYRLGD
TAGATAILKR AYDLQPNAEI GAHLGEVLWR SGSRDEARAA WRAAQKLEPD NDTLVQTLKR
LQVNGL
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