Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0588 |
Symbol | lolB |
ID | 4902517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 556364 |
End bp | 556978 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640133818 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_001064870 |
Protein GI | 126451510 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0129159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGTT TTGCCCAACC GCGCGCGCGC GGCGTCGCCC TCGTCGTGGC GGCCGCGGCC GCCGTCCTGC TCGGCGCCTG CGCGACGCAG CCGCCGCGCG CGCCCGCCGC CGCGCCCGAC GCGCGGCAGA CCGAGCAGAA TCGCGCGTAC ACGGGCCGCT TCGCGGTTCA GTACCAAGAC CCGCTCGGCA ATCCGCGCAA CGTCTACGGC AATTTCGACT GGCAGGAGCA GGGCACGAAC GTGTCGCTCG AACTGCGCAG CCCGCTCGGC CAGACGCTTG CGATCGTGAA ATCCGCGCCG GGCGGCGCGT CGCTCGAACT GCCGAACCGT CAGCCGCAAT TCGCGCCGGA CGTCGGCGAA CTGATGCAGC GCGCGCTCGG CTTCGCGCTG CCGCTCGACG GCCTGCGCTA CTGGCTGTTG CCGACGCCGT CGCCGACGAC GCCCGCGACG ACGGTGCGCG ATCCGCAGGA CGGCGCGCGA ATCAAGGAAA TCCGTCAGGA CGGCTGGACC ATCGATTACG TCGCATACGC CGACGCGCCC GCCGCCGGCG TGAAGCGCAT CAATCTGGCG CGGCAGACGC CGCCCCTCGA CATCAAGCTC GTGCTCGACC GCTGA
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Protein sequence | MPRFAQPRAR GVALVVAAAA AVLLGACATQ PPRAPAAAPD ARQTEQNRAY TGRFAVQYQD PLGNPRNVYG NFDWQEQGTN VSLELRSPLG QTLAIVKSAP GGASLELPNR QPQFAPDVGE LMQRALGFAL PLDGLRYWLL PTPSPTTPAT TVRDPQDGAR IKEIRQDGWT IDYVAYADAP AAGVKRINLA RQTPPLDIKL VLDR
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