Gene BURPS1106A_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0588 
SymbollolB 
ID4902517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp556364 
End bp556978 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID640133818 
Productouter membrane lipoprotein LolB 
Protein accessionYP_001064870 
Protein GI126451510 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID[TIGR00548] outer membrane lipoprotein LolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0129159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGTT TTGCCCAACC GCGCGCGCGC GGCGTCGCCC TCGTCGTGGC GGCCGCGGCC 
GCCGTCCTGC TCGGCGCCTG CGCGACGCAG CCGCCGCGCG CGCCCGCCGC CGCGCCCGAC
GCGCGGCAGA CCGAGCAGAA TCGCGCGTAC ACGGGCCGCT TCGCGGTTCA GTACCAAGAC
CCGCTCGGCA ATCCGCGCAA CGTCTACGGC AATTTCGACT GGCAGGAGCA GGGCACGAAC
GTGTCGCTCG AACTGCGCAG CCCGCTCGGC CAGACGCTTG CGATCGTGAA ATCCGCGCCG
GGCGGCGCGT CGCTCGAACT GCCGAACCGT CAGCCGCAAT TCGCGCCGGA CGTCGGCGAA
CTGATGCAGC GCGCGCTCGG CTTCGCGCTG CCGCTCGACG GCCTGCGCTA CTGGCTGTTG
CCGACGCCGT CGCCGACGAC GCCCGCGACG ACGGTGCGCG ATCCGCAGGA CGGCGCGCGA
ATCAAGGAAA TCCGTCAGGA CGGCTGGACC ATCGATTACG TCGCATACGC CGACGCGCCC
GCCGCCGGCG TGAAGCGCAT CAATCTGGCG CGGCAGACGC CGCCCCTCGA CATCAAGCTC
GTGCTCGACC GCTGA
 
Protein sequence
MPRFAQPRAR GVALVVAAAA AVLLGACATQ PPRAPAAAPD ARQTEQNRAY TGRFAVQYQD 
PLGNPRNVYG NFDWQEQGTN VSLELRSPLG QTLAIVKSAP GGASLELPNR QPQFAPDVGE
LMQRALGFAL PLDGLRYWLL PTPSPTTPAT TVRDPQDGAR IKEIRQDGWT IDYVAYADAP
AAGVKRINLA RQTPPLDIKL VLDR