| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0573 |
|---|
| Symbol | nirB |
|---|
| ID | 4900818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 544713 |
|---|
| End bp | 547157 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640133803 |
|---|
| Product | nitrite reductase [NAD(P)H], large subunit |
|---|
| Protein accession | YP_001064856 |
|---|
| Protein GI | 126454742 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAGA TGAAGCTGGT GATGGTCGGC AACGGCATGG CCGGAGTGCG CACGCTCGAA
GAATTGTTCA AGCTCGCGCC CGATTTGTAC GACGTGACGG TATTCGGCGC CGAACCGCAT
CCGAACTACA ACCGGATCCT GCTGTCGCCC GTGCTCGCCG GCGAGCAGAC GCTCGAGCAG
ATCGTCCTCA ACGATTACGC ATGGTACGCA TCGCACGGCG TCACGCTCCA CGTCGGCAAG
AAGATCGTGA AGATCGATCG CGTGAAGCGC GTCGTGATCG CCGACGACGG CACCGAGGCC
GCATACGACC GGCTGCTGCT CGCGACCGGC TCGAACCCGT TCATGCTGCC CGTTCCGGGC
GCGCAGCTCG ACGGCGTGCT CGGCTATCGC GACATCGCGG ACACGCAGGC GATGATCGAC
GCCGCCGCGC GGCACACGCA CGCGGCCGTG ATCGGCGGCG GCCTGCTCGG CCTCGAGGCG
GCGAACGGCC TGAAGCTGCG CGGCATGGAC GTGACGGTCG TGCACCTCGC GCCGACGCTG
CTCGAGCGCC AGCTCGACGC GAAGGCGGGC GGCCTGTTGC GCGCGTCGCT GGAGGCGCGC
GGGCTGACGT TTCTGATGCC GAAGCAAACG CAGGCGCTCG TCGGCGACGA GCACGGCCGC
GTGCGCGCGG TGCACTTCAA GGACGGCGGC GAATGCAAGG CCGACCTCGT CGTGATGGCG
GTCGGCATTC GCCCGAACAC GGCGCTCGCC GAAAGCGCGG GCCTCTATTG CAATCGCGGG
ATCGTCGTCA ACGACACGAT GCAGACCTAC GATCCGCGCA TCTACGCGGT CGGCGAATGC
GTGAGCCACC GCGGTATCGC GTACGGCCTC GTCGCGCCGC TGTTCGAACA GGCGAAAGTC
GCGGCGAACC ATCTCGCGCA GTTCGGCATC GGCCGCTACA CGGGCTCGGT GACGTCGACG
AAGCTCAAGG TCACGGGCAT CGACCTGTTC TCCGCGGGCG ACTTCCTCGG CGGCGACGAT
ACCGAAGACA TCACGCTGTC CGATCCGATC GCGGGCGTCT ACAAGAAGCT CGTGATCAAG
GACGACAGGA TCGTTGGCGC GTGCCTGTAC GGCGACACGG CCGACGGCGC GTGGTATTTC
AAGCTGCTGC GCGAAGGCCG CAACATCGCG GACATCCGCG AGACGCTGAT GTTCGGCGAG
ACGAGCCTCG GCGACACCGG CCACAGCGGC GCGACGCGCG CGATGACGAT GGCCGACGAC
GCCGAGGTGT GCGGCTGCAA CGGCGTGTGC AAGGGCACGA TCGTATCGGC GATCAAGGAA
AAAGGCTTCT TCACGCTCGA CGACGTGCGC AGGCACACGA AGGCGTCGGC GTCGTGCGGC
TCGTGCACCG GCCTCGTCGA GCAGATCCTG ATGTCGACGC TCGGCGGCGA CTATTCGGCG
TCGCCGAAGG CGAAGCCCGT ATGCGGCTGC ACCGATCATA CGCATGCCGA AGTGCGCGCG
GCGATCCGCG AGCACAAGCT GCTGTCGGTG CCGGAGGCGA TGCGCTTTCT CGAATGGCGC
ACGCCGAACG GCTGCTCGAG CTGCCGCCCG GCGCTCAACT ACTACTGCAT CAGCACGTGG
CCGCACGACG CGAAGGACGA TCCGCAGTCG CGCTTCATCA ACGAGCGCGC GCACGCGAAC
ATCCAGAAGG ACGGCACGTA TTCGGTCGTG CCGCGGATGT GGGGCGGCGT GACGAGCGCC
GACGAGTTGC GCCGCATCGC CGACGTCGTC GACAAGTACG CGATCCCGAC CGTCAAGGTG
ACGGGCGGCC AGCGCATCGA TCTGCTCGGC GTGAAGAAGG AGGACCTGCC CGGCGTGTGG
CGCGACCTCG GCATGCCGAG CGGCCACGCG TACGCGAAGG CGCTGCGCAC GGTGAAGACC
TGCGTCGGCT CCGAATGGTG CCGCTTCGGC ACGCAGGATT CGACGCTGAT GGGCCAGCAG
CTCGAACGCG CGCTGTGGCG GATGTACGCG CCGCACAAGG TGAAGCTCGC GGTGTCCGGC
TGCCCGCGCA ACTGCGCGGA ATCGGGGATC AAGGACGTCG GCGTGATCGG CGTCGATTCG
GGCTGGGAGA TCTACGTCGG CGGCAACGGC GGCATCAAGA CCGAAGTCGC GCAATTCTTC
TGCAAGGTGA AGACGCACGA GGAGGTGCTC GAATATGCGG GCGCGTTCCT GCAGCTGTAT
CGCGAGGAAG GCTGGTATCT CGAGCGCACC GTGCACTATC TCGAGCGCGT CGGCCTCGAC
CACGTGAAGG CGCGCGTGCT CGGCGACGCC GAGAACCGCC GCGCGCTGTG GGACAGGCTG
CAGTTCGCGC TGAAGGACGA GCCGGACCCG TGGCACGACA CGCAGGACGC GAAGGTCGAT
CTGCGCCAGT TCATCCCGAT CGCCGTCGCG CCCGCCGATG CGTGA
|
|---|
| Protein sequence | MRKMKLVMVG NGMAGVRTLE ELFKLAPDLY DVTVFGAEPH PNYNRILLSP VLAGEQTLEQ
IVLNDYAWYA SHGVTLHVGK KIVKIDRVKR VVIADDGTEA AYDRLLLATG SNPFMLPVPG
AQLDGVLGYR DIADTQAMID AAARHTHAAV IGGGLLGLEA ANGLKLRGMD VTVVHLAPTL
LERQLDAKAG GLLRASLEAR GLTFLMPKQT QALVGDEHGR VRAVHFKDGG ECKADLVVMA
VGIRPNTALA ESAGLYCNRG IVVNDTMQTY DPRIYAVGEC VSHRGIAYGL VAPLFEQAKV
AANHLAQFGI GRYTGSVTST KLKVTGIDLF SAGDFLGGDD TEDITLSDPI AGVYKKLVIK
DDRIVGACLY GDTADGAWYF KLLREGRNIA DIRETLMFGE TSLGDTGHSG ATRAMTMADD
AEVCGCNGVC KGTIVSAIKE KGFFTLDDVR RHTKASASCG SCTGLVEQIL MSTLGGDYSA
SPKAKPVCGC TDHTHAEVRA AIREHKLLSV PEAMRFLEWR TPNGCSSCRP ALNYYCISTW
PHDAKDDPQS RFINERAHAN IQKDGTYSVV PRMWGGVTSA DELRRIADVV DKYAIPTVKV
TGGQRIDLLG VKKEDLPGVW RDLGMPSGHA YAKALRTVKT CVGSEWCRFG TQDSTLMGQQ
LERALWRMYA PHKVKLAVSG CPRNCAESGI KDVGVIGVDS GWEIYVGGNG GIKTEVAQFF
CKVKTHEEVL EYAGAFLQLY REEGWYLERT VHYLERVGLD HVKARVLGDA ENRRALWDRL
QFALKDEPDP WHDTQDAKVD LRQFIPIAVA PADA
|
|---|
| |