| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0521 |
|---|
| Symbol | |
|---|
| ID | 4900661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 483577 |
|---|
| End bp | 484422 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640133751 |
|---|
| Product | YaeC family lipoprotein |
|---|
| Protein accession | YP_001064804 |
|---|
| Protein GI | 126453491 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.31183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTGC AAGCAAGCGA GAAACAGATG AAGCGTCGCA CTCTCCTGAA AGTTGTCTCC
GCGGTCGCGG CCGGCGCCGC CGCCCTTTCC GTTTCCGTCG GCGCGCAAGC GCAGGACAAG
GTGATCAAGG TGGGCACGGT CGCGGGCCCG GACGCGCAGG TCTGGCAAGT CGTCCAGAAG
GTCGCGAAGG AAAAGCAGGG CCTCGACGTG AAGGTCATCG AGTTCAACGA CTACGTGCAG
CCGAACGCGG CGCTCGATTC GGGCGACCTC GACGCGAACA GCTTCCAGCA CCAGCCGTAC
CTCGACAGCC AGGTGAAGCA GCGCGGCTAC AAGATCGTGA GCGCGGGCCT CACGTACATC
TCGCCGATCG GCGTCTATTC GAAGAAGTTC AAATCGCTGA AGGAACTGCC GGCGGGCGCG
AAGGTCGCGC TGCCGAACGA TCCGTCGAAC GAGAACCGCG CGCTGCTGCT GCTGCAGACG
CAGGGCGTGA TCAAGCTGAA GGCGGGCGCC GGCACGGGCG GCAGCAACGC GACCGTGCTC
GACGTCGCCG AGAATCCGAA GAAGCTGAAG CTCACCGAGC TCGACGCCGC GCAACTGCCG
CGCGTGCTGT CGGACGTCGA TGCGGCCGTG ATCAACACGA ACTACGCGCT CGCGGCGAAC
CTGCAGCCGA CCAAGGACGC GATCGCGCTC GAATCGCTGA CGAGCCCGTA CGCGAACCTG
ATCGCGGTCC GCGCGAAGGA CAAGGATCAG CCGTGGGTGA AGAAGCTCGT GAAGGCATAC
CAGTCGCCGG AGGTGAAGGA ATTCATCACG AAGCAGTTCA AGGGCTCGAT GGTCGCGTCG
TTCTGA
|
|---|
| Protein sequence | MVLQASEKQM KRRTLLKVVS AVAAGAAALS VSVGAQAQDK VIKVGTVAGP DAQVWQVVQK
VAKEKQGLDV KVIEFNDYVQ PNAALDSGDL DANSFQHQPY LDSQVKQRGY KIVSAGLTYI
SPIGVYSKKF KSLKELPAGA KVALPNDPSN ENRALLLLQT QGVIKLKAGA GTGGSNATVL
DVAENPKKLK LTELDAAQLP RVLSDVDAAV INTNYALAAN LQPTKDAIAL ESLTSPYANL
IAVRAKDKDQ PWVKKLVKAY QSPEVKEFIT KQFKGSMVAS F
|
|---|
| |