Gene BURPS1106A_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0416 
Symbol 
ID4901456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand- 
Start bp379593 
End bp380270 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID640133646 
Productshort chain dehydrogenase 
Protein accessionYP_001064699 
Protein GI126453017 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCG TATTGATCGT CGGCGCATCG CGCGGCATCG GCCGCGAATT CGTCGGCCAG 
TATCTGCATG ACGGCTGGCG CGTGATCGCC ACGGCGCGCG ACGCCGCGGC GCTCGCGGCG 
CTCGATGCGC TCGGCGCGCG CGCGCTCGCG CTCGACGTCG CGCAGCCCGA CGACATCGCG 
ACATTCGACG CGCGCCTCGG CGGCGCCGCG CTCGACGCGG CCGTCGTCGT GTCGGGCGTG 
TACGGCCCGC GCACGGCGGG CGTCGAGCCC ATCGGCGTGG AGGACTTCGA TGCGGTGATG 
CACACGAACG TGCTCGGCCC GATGCTGCTG ATGCCGATCC TGCTGCCGCG CGTCGAGGCG 
AGCCGCGGCG TCCTCGCGGT GCTGTCGAGC AAGATGGGCA GCATCGGCGA GGCGACCGGC 
ACGACCGGCT GGCTCTATCG CGCGAGCAAG GCGGCGGTGA ACGACGCGCT CAGGATCGCT 
TCGCTGCAGG CGCGGCACGC GGCCTGCATC GCGCTGCATC CGGGCTGGGT GCGCACCGAC 
ATGGGCGGCG CGCAGGCGGC GCTCGATCCG CAGGCGAGCG TCGCCGGCAT GCGCCGCGTG 
ATCGCGCAGG CGGCGGGCGA CCGCGAGCGC GCGAACGGTC GCTTCTTCCA ATACGATGGC 
GTCGAGCTCG GCTGGTGA
 
Protein sequence
MKTVLIVGAS RGIGREFVGQ YLHDGWRVIA TARDAAALAA LDALGARALA LDVAQPDDIA 
TFDARLGGAA LDAAVVVSGV YGPRTAGVEP IGVEDFDAVM HTNVLGPMLL MPILLPRVEA 
SRGVLAVLSS KMGSIGEATG TTGWLYRASK AAVNDALRIA SLQARHAACI ALHPGWVRTD 
MGGAQAALDP QASVAGMRRV IAQAAGDRER ANGRFFQYDG VELGW