Gene BURPS1106A_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0378 
Symbol 
ID4900638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand- 
Start bp344936 
End bp345529 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content61% 
IMG OID640133608 
ProductSCO1/SenC family protein 
Protein accessionYP_001064661 
Protein GI126453244 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGGC GAAAGGCGTT GGGCGCGTTA TGTTCACTCG CCCTTGCCGG GGCACCGGTC 
GGATCGCGGG CGGCCACGCC GTTCTATTCG TTGCCGCTGA GCAGCAAGGA CTGGCACAAG 
GGATTCCGGC TAACGGATCT GCACGGCCAT ACGAAGACGC CGCAAGACTA TCGGGGCAAC 
GTACTCCTGC TCTTCTTCGG CTTCCTCAGT TGTCCGAGCA TCTGCTCGAC CACCATGCTC 
GAACTGACAC AGGCGAAGGA ACGCGTCGGC GCGCAAAAGG ACAAGGTCAA GATTCTCTTC 
GTCACCCTGG ACCCGAATCG CGACACCTCG CCGACCATCG CCCGCTGGCT CGCCAGTTTC 
GGCGACGACA ACATCGGGCT GCGCGATAGC GAGGCACATG TTCGGAAGGC GGCCACCGCG 
TTGAACCTGA AATACGAGCG CGTCGAAGGA GACGTTCCCG GTGCCTATAC GATCGATCAC 
GGCGTTCAGA CGTATGTGTT CGATCCGCAA GGGCGATTGC GCTTGATCGC CCGAGCCGGC 
ATCGAGCCCG AGTACGTGGC GAAAGACATC GTTCAGCTGC TTTCCGGCCG CTAG
 
Protein sequence
MMRRKALGAL CSLALAGAPV GSRAATPFYS LPLSSKDWHK GFRLTDLHGH TKTPQDYRGN 
VLLLFFGFLS CPSICSTTML ELTQAKERVG AQKDKVKILF VTLDPNRDTS PTIARWLASF 
GDDNIGLRDS EAHVRKAATA LNLKYERVEG DVPGAYTIDH GVQTYVFDPQ GRLRLIARAG 
IEPEYVAKDI VQLLSGR